RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 PLXDC1Q8IUK5 500 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 CELF5Q8N6W0 485 aaKnown RBP5.07□□□□□ -1.6
SNRPF-202ENST00000549580 STON2Q8WXE9 905 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 HAS1Q92839 578 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 MPHOSPH9Q99550 1183 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 TRIM54Q9BYV2 358 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 UBA5Q9GZZ9 404 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 SLC6A15Q9H2J7 730 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 CERS4Q9HA82 394 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 CNNM1Q9NRU3 951 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 STK32BQ9NY57 414 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 LUZP4Q9P127 313 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 CPNE7Q9UBL6 633 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 ACTL7AQ9Y615 435 aa5.07□□□□□ -1.6
SNRPF-202ENST00000549580 A0A1W2PPC4 97 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 NRP1O14786 923 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 BRAFP15056 766 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 NR4A1P22736 598 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 PTPN7P35236 360 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 MAN2A2P49641 1150 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
SNRPF-202ENST00000549580 HTRA4P83105 476 aaPredicted RBP5.06□□□□□ -1.6
SNRPF-202ENST00000549580 TNFAIP2Q03169 654 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 FAM47AQ5JRC9 791 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 OTUD7BQ6GQQ9 843 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 PDZD4Q76G19 769 aaPredicted RBP5.06□□□□□ -1.6
SNRPF-202ENST00000549580 IL17RDQ8NFM7 739 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 ARL8AQ96BM9 186 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 NMD3Q96D46 503 aaKnown RBP5.06□□□□□ -1.6
SNRPF-202ENST00000549580 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 KCNH6Q9H252 994 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 PNPLA8Q9NP80 782 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 MOCS1Q9NZB8 636 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 COL20A1Q9P218 1284 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 ZDHHC8Q9ULC8 765 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 MED16Q9Y2X0 877 aa5.06□□□□□ -1.6
SNRPF-202ENST00000549580 MORC2Q9Y6X9 1032 aaPredicted RBP5.06□□□□□ -1.6
SNRPF-202ENST00000549580 XDHP47989 1333 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 A0A087WV62 115 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 PMS2P1A4D2B8 440 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 PRSS29PA6NIE9 313 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 MATN4O95460 622 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 AHSGP02765 367 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 CD1AP06126 327 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 ALDH1A3P47895 512 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 PIK3CGP48736 1102 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 BPIFB4P59827 614 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 PABPC1LQ4VXU2 614 aaKnown RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 MFSD14BQ5SR56 506 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 SEM1Q6ZVN7 128 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 SMAP1Q8IYB5 467 aaPredicted RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 ANKRD35Q8N283 1001 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 FBXO18Q8NFZ0 1043 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 MDM1Q8TC05 714 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 SLC25A43Q8WUT9 341 aaPredicted RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 MIEF2Q96C03 454 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 TMEM41AQ96HV5 264 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 RPL10LQ96L21 214 aaKnown RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 CDC5LQ99459 802 aaKnown RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 P2RX7Q99572 595 aaKnown RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 TTLL2Q9BWV7 592 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 BRIP1Q9BX63 1249 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 GPR87Q9BY21 358 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 MAF1Q9H063 256 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 C11orf54Q9H0W9 315 aaPredicted RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 GNL3LQ9NVN8 582 aaKnown RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 RGS17Q9UGC6 210 aaPredicted RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 AFF4Q9UHB7 1163 aaKnown RBP5.05□□□□□ -1.6
SNRPF-202ENST00000549580 CDC23Q9UJX2 597 aa5.05□□□□□ -1.6
SNRPF-202ENST00000549580 TRIM43BA6NCK2 446 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 APOL1O14791 398 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 ADAMTS3O15072 1205 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 GRM6O15303 877 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 SLC43A1O75387 559 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 THP07101 528 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PARP1P09874 1014 aaKnown RBP5.04□□□□□ -1.6
SNRPF-202ENST00000549580 HDCP19113 662 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PTGS2P35354 604 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 CASRP41180 1078 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 GRK6P43250 576 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 SOX8P57073 446 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 POU5F1BQ06416 359 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PMS2P11Q13670 270 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 TRIM14Q14142 442 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 ELAVL1Q15717 326 aaKnown RBP5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PDCD2Q16342 344 aaPredicted RBP5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PRR16Q569H4 304 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 AFMIDQ63HM1 303 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 TLDC1Q6P9B6 456 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 CCDC174Q6PII3 467 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 RHOUQ7L0Q8 258 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 LIX1LQ8IVB5 337 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 GSPT2Q8IYD1 628 aaKnown RBP5.04□□□□□ -1.6
SNRPF-202ENST00000549580 CMTM4Q8IZR5 234 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 CPXCR1Q8N123 301 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 ZNF276Q8N554 614 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 ANKRD53Q8N9V6 530 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 ATP11CQ8NB49 1132 aa5.04□□□□□ -1.6
SNRPF-202ENST00000549580 PNISRQ8TF01 805 aaKnown RBP5.04□□□□□ -1.6
SNRPF-202ENST00000549580 MAML1Q92585 1016 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms