RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 RCOR2Q8IZ40 523 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 CPA5Q8WXQ8 436 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TFAP2BQ92481 460 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 NLRP4Q96MN2 994 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 APBA2Q99767 749 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 INO80BQ9C086 356 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 PHACTR1Q9C0D0 580 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 AMACRQ9UHK6 382 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 IGF2BP3O00425 579 aaKnown RBP eCLIP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TTI1O43156 1089 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 SETSIPP0DME0 302 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 HSP90B2PQ58FF3 399 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TNFAIP8L3Q5GJ75 292 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 TMEM192Q8IY95 271 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 NEUROG2Q9H2A3 272 aa10.6□□□□□ -0.71
RAB5B-206ENST00000549505 DDX56Q9NY93 547 aaKnown RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 FEZ2Q9UHY8 353 aaPredicted RBP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.6□□□□□ -0.71
RAB5B-206ENST00000549505 ZSCAN5CA6NGD5 496 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 ATMINO43313 823 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 THAP12O43422 761 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 HSF2BPO75031 334 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 RNF40O75150 1001 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 GJB1P08034 283 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 SMIM10L2AP0DMW4 78 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 SMIM10L2BP0DMW5 78 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 IVDP26440 423 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 MATR3P43243 847 aaKnown RBP eCLIP10.59□□□□□ -0.711e-7■■■□□ 16.9
RAB5B-206ENST00000549505 CPT1AP50416 773 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 EIF3BP55884 814 aaKnown RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 CAV1Q03135 178 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 ZNF667Q5HYK9 610 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 CFAP58Q5T655 872 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 SLC27A1Q6PCB7 646 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 LCLAT1Q6UWP7 414 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 FAM43BQ6ZT52 329 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 KLHL7Q8IXQ5 586 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 GSPT2Q8IYD1 628 aaKnown RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 ZIM3Q96PE6 472 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 KATNAL1Q9BW62 490 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 GCOM2Q9BZD3 368 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 FOXP3Q9BZS1 431 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 EPB41L4BQ9H329 900 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 GDAP2Q9NXN4 497 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 FLRT1Q9NZU1 646 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 DRG1Q9Y295 367 aaKnown RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 C3orf70A6NLC5 250 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 DPYSL4O14531 572 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 ENDOD1O94919 500 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 ZNF286BP0CG31 522 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 TMEM132DQ14C87 1099 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 ARHGAP17Q68EM7 881 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 CHADLQ6NUI6 762 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 UNC93AQ86WB7 457 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 TMEM176AQ96HP8 235 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 ACAP3Q96P50 834 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 TCHPQ9BT92 498 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 DCLK3Q9C098 648 aa10.59□□□□□ -0.71
RAB5B-206ENST00000549505 BARX2Q9UMQ3 279 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-206ENST00000549505 SPOPO43791 374 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 ERBB2P04626 1255 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 RGS2P41220 211 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 SEZ6Q53EL9 994 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 CROCCP2Q86T23 111 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 GOLGA6L1Q8N7Z2 621 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 CEP120Q8N960 986 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 MIS12Q9H081 205 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 TSPYL1Q9H0U9 437 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 TMBIM4Q9HC24 238 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 GTF2IRD1Q9UHL9 959 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 FAN1Q9Y2M0 1017 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 HMGB1P1B2RPK0 211 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 ECM2O94769 699 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 HSD17B3P37058 310 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 MFSD10Q14728 455 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 MMS22LQ6ZRQ5 1243 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 GRK7Q8WTQ7 553 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 RBM41Q96IZ5 413 aaKnown RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 FAM84AQ96KN4 292 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 TRAIPQ9BWF2 469 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 CFHR5Q9BXR6 569 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 ELOVL4Q9GZR5 314 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 O00370 1275 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 PIRO00625 290 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 NDC80O14777 642 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 TCEA3O75764 348 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 GPD2P43304 727 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 TNNT3P45378 269 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 PSEN2P49810 448 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 CRYBB1P53674 252 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 GJA9P57773 515 aa10.58□□□□□ -0.72
RAB5B-206ENST00000549505 TFAMQ00059 246 aaKnown RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 PTPN11Q06124 597 aaPredicted RBP10.58□□□□□ -0.72
RAB5B-206ENST00000549505 TRADDQ15628 312 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms