RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 C17orf75Q9HAS0 396 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 TOPORSQ9NS56 1045 aaPredicted RBP13.3□□□□□ -0.28
DDX54-206ENST00000549271 ARHGAP28Q9P2N2 729 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 KLK13Q9UKR3 277 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 GPSM3Q9Y4H4 160 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 CACNA1EQ15878 2313 aa13.3□□□□□ -0.28
DDX54-206ENST00000549271 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 ATG13O75143 517 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 RHOBTB1O94844 696 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 LIG1P18858 919 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 PROZP22891 400 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 NPTX2P47972 431 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 ARPP19P56211 112 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 GLRA4Q5JXX5 417 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 KIAA1211LQ6NV74 962 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 DTHD1Q6ZMT9 781 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 PROSER1Q86XN7 944 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 ARID3BQ8IVW6 561 aaPredicted RBP13.29□□□□□ -0.28
DDX54-206ENST00000549271 DAW1Q8N136 415 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 NTPCRQ9BSD7 190 aaKnown RBP13.29□□□□□ -0.28
DDX54-206ENST00000549271 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 CCDC94Q9BW85 323 aaPredicted RBP13.29□□□□□ -0.28
DDX54-206ENST00000549271 CDT1Q9H211 546 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 GOLGA2P5Q9HBQ8 144 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 POLD4Q9HCU8 107 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 DDX19AQ9NUU7 478 aaKnown RBP13.29□□□□□ -0.28
DDX54-206ENST00000549271 SLC38A7Q9NVC3 462 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 FBXL5Q9UKA1 691 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 MAFFQ9ULX9 164 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 DNM3Q9UQ16 869 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 RBM19Q9Y4C8 960 aaKnown RBP13.29□□□□□ -0.28
DDX54-206ENST00000549271 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
DDX54-206ENST00000549271 FAM221BA6H8Z2 402 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 SYN3O14994 580 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 MCF2P10911 925 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 KCNE1P15382 129 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
DDX54-206ENST00000549271 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
DDX54-206ENST00000549271 TNK2Q07912 1038 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 KARSQ15046 597 aaKnown RBP13.28□□□□□ -0.28
DDX54-206ENST00000549271 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 FSTL4Q6MZW2 842 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 PDZD3Q86UT5 571 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 TMC8Q8IU68 726 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 KCTD17Q8N5Z5 321 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 DEFB124Q8NES8 71 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 SNX29Q8TEQ0 813 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 TMEM209Q96SK2 561 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 TIPINQ9BVW5 301 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 MRPL4Q9BYD3 311 aaKnown RBP13.28□□□□□ -0.28
DDX54-206ENST00000549271 POLR3BQ9NW08 1133 aaPredicted RBP13.28□□□□□ -0.28
DDX54-206ENST00000549271 OBP2AQ9NY56 170 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 AFF4Q9UHB7 1163 aaKnown RBP13.28□□□□□ -0.28
DDX54-206ENST00000549271 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 CITO14578 2027 aa13.28□□□□□ -0.28
DDX54-206ENST00000549271 CELSR3Q9NYQ7 3312 aa13.27□□□□□ -0.28
DDX54-206ENST00000549271 A0A1W2PRU2 124 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 E9PMD0 336 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 H7C4K7 107 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 ABLIM1O14639 778 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 KHNYNO15037 678 aaKnown RBP13.27□□□□□ -0.29
DDX54-206ENST00000549271 DCLK1O15075 740 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 RPL9P32969 192 aaKnown RBP13.27□□□□□ -0.29
DDX54-206ENST00000549271 PEX3P56589 373 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 SOX4Q06945 474 aaPredicted RBP13.27□□□□□ -0.29
DDX54-206ENST00000549271 MAPK7Q13164 816 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 DMP1Q13316 513 aaPredicted RBP13.27□□□□□ -0.29
DDX54-206ENST00000549271 STXBP5Q5T5C0 1151 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 KRT79Q5XKE5 535 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.29
DDX54-206ENST00000549271 C1orf186Q6ZWK4 172 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 TAS1R3Q7RTX0 852 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 KCNK18Q7Z418 384 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 HAUS6Q7Z4H7 955 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 CEP120Q8N960 986 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 CHFRQ96EP1 664 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 DRC1Q96MC2 740 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 ZMAT2Q96NC0 199 aaKnown RBP13.27□□□□□ -0.29
DDX54-206ENST00000549271 CNTN3Q9P232 1028 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 TNRC6BQ9UPQ9 1833 aaKnown RBP13.27□□□□□ -0.29
DDX54-206ENST00000549271 PI4KAP42356 2102 aa13.27□□□□□ -0.29
DDX54-206ENST00000549271 CCDC169A6NNP5 214 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 PATE3B3GLJ2 98 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 PODXLO00592 558 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 HIP1RO75146 1068 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 GUCY2CP25092 1073 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 ITPRIPL2Q3MIP1 535 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 ZNF568Q3ZCX4 644 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 HYIQ5T013 277 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 RINT1Q6NUQ1 792 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 C19orf48Q6RUI8 117 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 MPZL3Q6UWV2 235 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 BRAPQ7Z569 592 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 BEST2Q8NFU1 509 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
DDX54-206ENST00000549271 KCNN1Q92952 543 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms