RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 SIX2Q9NPC8 291 aa28.23■■■□□ 2.11
CHPT1-204ENST00000549128 NGRNQ9NPE2 291 aaKnown RBP28.23■■■□□ 2.11
CHPT1-204ENST00000549128 IRAK3Q9Y616 596 aa28.23■■■□□ 2.11
CHPT1-204ENST00000549128 ADAM12O43184 909 aa28.22■■■□□ 2.11
CHPT1-204ENST00000549128 SMC1AQ14683 1233 aaKnown RBP28.22■■■□□ 2.11
CHPT1-204ENST00000549128 GJB7Q6PEY0 223 aa28.22■■■□□ 2.11
CHPT1-204ENST00000549128 GLYCTKQ8IVS8 523 aa28.22■■■□□ 2.11
CHPT1-204ENST00000549128 GABRDO14764 452 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 TBC1D4O60343 1298 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 CNPP09543 421 aaKnown RBP28.21■■■□□ 2.11
CHPT1-204ENST00000549128 LMO2P25791 158 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 NR1I3Q14994 352 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 PTPROQ16827 1216 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 FKBP15Q5T1M5 1219 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 ANKS3Q6ZW76 656 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 RRAGAQ7L523 313 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 GUCD1Q96NT3 240 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 CDX2Q99626 313 aaPredicted RBP28.21■■■□□ 2.11
CHPT1-204ENST00000549128 CLSTN3Q9BQT9 956 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 DSEQ9UL01 958 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 MTCH2Q9Y6C9 303 aa28.21■■■□□ 2.11
CHPT1-204ENST00000549128 PRRC2BQ5JSZ5 2229 aaKnown RBP28.2■■■□□ 2.11
CHPT1-204ENST00000549128 AP5Z1O43299 807 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 TACC1O75410 805 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 P4HA1P13674 534 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 CTXN3Q4LDR2 81 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 METTL23Q86XA0 190 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 TMEM86AQ8N2M4 240 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 PPM1KQ8N3J5 372 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 OR10T2Q8NGX3 314 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 MYLIPQ8WY64 445 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 TMEM209Q96SK2 561 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 RXFP1Q9HBX9 757 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 IFNKQ9P0W0 207 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 MTRRQ9UBK8 725 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 FBXL5Q9UKA1 691 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 SIK3Q9Y2K2 1263 aa28.2■■■□□ 2.11
CHPT1-204ENST00000549128 ARHGEF37A1IGU5 675 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 TEX28O15482 410 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 IGFBP4P22692 258 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 WARSP23381 471 aaKnown RBP28.2■■■□□ 2.1
CHPT1-204ENST00000549128 UBASH3AP57075 661 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 CUL2Q13617 745 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 SYCP1Q15431 976 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 KLHL5Q96PQ7 755 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 DDX43Q9NXZ2 648 aaKnown RBP28.2■■■□□ 2.1
CHPT1-204ENST00000549128 AJAP1Q9UKB5 411 aaPredicted RBP28.2■■■□□ 2.1
CHPT1-204ENST00000549128 CDY1Q9Y6F8 540 aa28.2■■■□□ 2.1
CHPT1-204ENST00000549128 PER2O15055 1255 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 ACAT1P24752 427 aaKnown RBP28.19■■■□□ 2.1
CHPT1-204ENST00000549128 FILIP1LQ4L180 1135 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 PDE12Q6L8Q7 609 aaKnown RBP28.19■■■□□ 2.1
CHPT1-204ENST00000549128 ZNF280DQ6N043 979 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 GPR65Q8IYL9 337 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 OR6B3Q8NGW1 331 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 KREMEN1Q96MU8 473 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 ERGIC2Q96RQ1 377 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 LSM14BQ9BX40 385 aaKnown RBP28.19■■■□□ 2.1
CHPT1-204ENST00000549128 UBE2TQ9NPD8 197 aaPredicted RBP28.19■■■□□ 2.1
CHPT1-204ENST00000549128 MTMR10Q9NXD2 777 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 HMGXB4Q9UGU5 601 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 SSX2IPQ9Y2D8 614 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 BACE2Q9Y5Z0 518 aa28.19■■■□□ 2.1
CHPT1-204ENST00000549128 REV3LO60673 3130 aa28.18■■■□□ 2.1
CHPT1-204ENST00000549128 PDGFRBP09619 1106 aa28.18■■■□□ 2.1
CHPT1-204ENST00000549128 OR4Q2P0C623 313 aa28.18■■■□□ 2.1
CHPT1-204ENST00000549128 CD58P19256 250 aa28.18■■■□□ 2.1
CHPT1-204ENST00000549128 CDR1P51861 262 aa28.18■■■□□ 2.1
CHPT1-204ENST00000549128 BMS1Q14692 1282 aaKnown RBP28.18■■■□□ 2.1
CHPT1-204ENST00000549128 RBM23Q86U06 439 aaKnown RBP28.18■■■□□ 2.1
CHPT1-204ENST00000549128 LMCD1Q9NZU5 365 aa28.18■■■□□ 2.1
CHPT1-204ENST00000549128 APEX2Q9UBZ4 518 aa28.18■■■□□ 2.1
CHPT1-204ENST00000549128 H7C4K7 107 aa28.17■■■□□ 2.1
CHPT1-204ENST00000549128 POU3F3P20264 500 aaPredicted RBP28.17■■■□□ 2.1
CHPT1-204ENST00000549128 OR1D2P34982 312 aa28.17■■■□□ 2.1
CHPT1-204ENST00000549128 GNL1P36915 607 aaPredicted RBP28.17■■■□□ 2.1
CHPT1-204ENST00000549128 CCDC142Q17RM4 750 aa28.17■■■□□ 2.1
CHPT1-204ENST00000549128 XPO4Q9C0E2 1151 aaKnown RBP28.17■■■□□ 2.1
CHPT1-204ENST00000549128 CYP3A43Q9HB55 503 aa28.17■■■□□ 2.1
CHPT1-204ENST00000549128 FNIP2Q9P278 1114 aa28.17■■■□□ 2.1
CHPT1-204ENST00000549128 STXBP5LQ9Y2K9 1186 aa28.17■■■□□ 2.1
CHPT1-204ENST00000549128 EPHB6O15197 1021 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 NOL4O94818 638 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 FAM163BP0C2L3 166 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 GTF2F1P35269 517 aaKnown RBP eCLIP28.16■■■□□ 2.1
CHPT1-204ENST00000549128 LHX1P48742 406 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 ARPP19P56211 112 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 ORC1Q13415 861 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 PDXDC1Q6P996 788 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 FAXDC2Q96IV6 333 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 TWNKQ96RR1 684 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 GAS2L1Q99501 681 aaPredicted RBP28.16■■■□□ 2.1
CHPT1-204ENST00000549128 LPIN3Q9BQK8 851 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 SNX25Q9H3E2 840 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.16■■■□□ 2.1
CHPT1-204ENST00000549128 CISHQ9NSE2 258 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 ATP2C2O75185 946 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 PLCB2Q00722 1185 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 TCEAL5Q5H9L2 206 aa28.16■■■□□ 2.1
CHPT1-204ENST00000549128 KLHDC7AQ5VTJ3 777 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms