RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 KREMEN2Q8NCW0 462 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 CCDC150Q8NCX0 1101 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 ZNF461Q8TAF7 563 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 ENOX1Q8TC92 643 aaKnown RBP10.3□□□□□ -0.76
RAB5B-205ENST00000549034 TAS1R2Q8TE23 839 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 TAF4BQ92750 862 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 PI4K2AQ9BTU6 479 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 OXCT2Q9BYC2 517 aaPredicted RBP10.3□□□□□ -0.76
RAB5B-205ENST00000549034 DNAJC25Q9H1X3 360 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 SNX25Q9H3E2 840 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 THAP9Q9H5L6 903 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 RAB20Q9NX57 234 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 DDX43Q9NXZ2 648 aaKnown RBP10.3□□□□□ -0.76
RAB5B-205ENST00000549034 CLEC1BQ9P126 229 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 DPP7Q9UHL4 492 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 CD207Q9UJ71 328 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 L1RE1Q9UN81 338 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.3□□□□□ -0.76
RAB5B-205ENST00000549034 PLXNA3P51805 1871 aa10.3□□□□□ -0.76
RAB5B-205ENST00000549034 CHD7Q9P2D1 2997 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CHD9Q3L8U1 2897 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 SYCE3A1L190 88 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 OR6C75A6NL08 312 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 LRRN2O75325 713 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 STAU1O95793 577 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 PDGFRBP09619 1106 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 FAM163BP0C2L3 166 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 P4HA1P13674 534 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CPB1P15086 417 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 GNL1P36915 607 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 MTIF2P46199 727 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 LHX1P48742 406 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 FMO5P49326 533 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 MXI1P50539 228 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CDH8P55286 799 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 MRPS5P82675 430 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 MYL7Q01449 175 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 ROR1Q01973 937 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CETN1Q12798 172 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 KCNH2Q12809 1159 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CBWD6Q4V339 395 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 WDR44Q5JSH3 913 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CBWD3Q5JTY5 395 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CBWD5Q5RIA9 395 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 SPOPLQ6IQ16 392 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 SLC8B1Q6J4K2 584 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 ELMSAN1Q6PJG2 1045 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 C11orf57Q6ZUT1 292 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 OSTM1Q86WC4 334 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 IRF2BP1Q8IU81 584 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 FAM114A1Q8IWE2 563 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 ADGRF2Q8IZF7 708 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 FBXL13Q8NEE6 735 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 OR6B3Q8NGW1 331 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 SEMA4DQ92854 862 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 SLC35C1Q96A29 364 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CNOT6LQ96LI5 555 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 PGLYRP2Q96PD5 576 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 MRPL45Q9BRJ2 306 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 IMPG2Q9BZV3 1241 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 NAT10Q9H0A0 1025 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 XYLT2Q9H1B5 865 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 PLEKHA4Q9H4M7 779 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 MAN1C1Q9NR34 630 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 SAMSN1Q9NSI8 373 aaKnown RBP10.29□□□□□ -0.76
RAB5B-205ENST00000549034 THEGQ9P2T0 379 aa10.29□□□□□ -0.76
RAB5B-205ENST00000549034 CCDC195A0A1B0GUA6 201 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 WDR27A2RRH5 827 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 N4BP1O75113 896 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 TBX10O75333 385 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ABLIM3O94929 683 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 C1RP00736 705 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 AFPP02771 609 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ATF2P15336 505 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 HOXB8P17481 243 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 CDK11BP21127 795 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 WARSP23381 471 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ACAT1P24752 427 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 LMO2P25791 158 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ADCY1Q08828 1119 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 LRMPQ12912 555 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 COL19A1Q14993 1142 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 AAK1Q2M2I8 961 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 LEXMQ3ZCV2 418 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 SLC39A12Q504Y0 691 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 PPM1LQ5SGD2 360 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 RARS2Q5T160 578 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 CES5AQ6NT32 575 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 SYCE2Q6PIF2 218 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 TMC5Q6UXY8 1006 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 TRIM59Q8IWR1 403 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 DCP1BQ8IZD4 617 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms