RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 IPPQ9Y573 584 aa5.34□□□□□ -1.55
CNOT2-216ENST00000548939 ZNF804BA4D1E1 1349 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 SPATA31A3Q5VYP0 1347 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 E9PLN8 166 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 HTRA2O43464 458 aaPredicted RBP5.33□□□□□ -1.56
CNOT2-216ENST00000548939 TRIAP1O43715 76 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 EBLN1P0CF75 366 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 CTGFP29279 349 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 CCT8P50990 548 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 KRTAP10-9P60411 292 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 TFF2Q03403 129 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 EIF2B5Q13144 721 aaKnown RBP5.33□□□□□ -1.56
CNOT2-216ENST00000548939 C3orf36Q3SXR2 165 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 TMEM119Q4V9L6 283 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 GIMAP6Q6P9H5 292 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 SLC30A10Q6XR72 485 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 C9orf106Q8NAJ2 232 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 C1orf162Q8NEQ5 155 aaPredicted RBP5.33□□□□□ -1.56
CNOT2-216ENST00000548939 VKORC1Q9BQB6 163 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 FAM126AQ9BYI3 521 aaPredicted RBP5.33□□□□□ -1.56
CNOT2-216ENST00000548939 CHD1O14646 1710 aa5.33□□□□□ -1.56
CNOT2-216ENST00000548939 URB2Q14146 1524 aaKnown RBP5.33□□□□□ -1.56
CNOT2-216ENST00000548939 CCDC154A6NI56 674 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 HNRNPCP07910 306 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNOT2-216ENST00000548939 PRR35P0CG20 571 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 DRD4P21917 467 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 IARSP41252 1262 aaKnown RBP5.32□□□□□ -1.56
CNOT2-216ENST00000548939 NDUFV1P49821 464 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 INAVAQ3KP66 663 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 PLAC9Q5JTB6 97 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 ZNF782Q6ZMW2 699 aaPredicted RBP5.32□□□□□ -1.56
CNOT2-216ENST00000548939 KAT5Q92993 513 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 SCAMP4Q969E2 229 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 RFKQ969G6 155 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 FKBP10Q96AY3 582 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 DMRTA2Q96SC8 542 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 PUS7LQ9H0K6 701 aaKnown RBP5.32□□□□□ -1.56
CNOT2-216ENST00000548939 MAN1C1Q9NR34 630 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 SLC5A4Q9NY91 659 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 EHD3Q9NZN3 535 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 PCDHB1Q9Y5F3 818 aa5.32□□□□□ -1.56
CNOT2-216ENST00000548939 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNOT2-216ENST00000548939 SETD1BQ9UPS6 1966 aaKnown RBP5.31□□□□□ -1.56
CNOT2-216ENST00000548939 KLHL33A6NCF5 533 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 MT-CO1P00395 513 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 RPLP2P05387 115 aaKnown RBP5.31□□□□□ -1.56
CNOT2-216ENST00000548939 ZFXP17010 805 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-216ENST00000548939 POU3F3P20264 500 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-216ENST00000548939 LPOP22079 712 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-216ENST00000548939 EDNRBP24530 442 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 SSBP2P81877 361 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-216ENST00000548939 MAPK7Q13164 816 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 CCDC93Q567U6 631 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 ZNF626Q68DY1 528 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 PDSS2Q86YH6 399 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 OSBPL9Q96SU4 736 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 ACTRT3Q9BYD9 372 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 AMBRA1Q9C0C7 1298 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 BRD9Q9H8M2 597 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 SERGEFQ9UGK8 458 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
CNOT2-216ENST00000548939 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.31□□□□□ -1.56
CNOT2-216ENST00000548939 TARM1B6A8C7 271 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 F2RL2O00254 374 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
CNOT2-216ENST00000548939 GNAI3P08754 354 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 MALP21145 153 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 KELP23276 732 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 PSMC1P62191 440 aaKnown RBP5.3□□□□□ -1.56
CNOT2-216ENST00000548939 GNAI1P63096 354 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 KIF23Q02241 960 aaPredicted RBP5.3□□□□□ -1.56
CNOT2-216ENST00000548939 BMPR2Q13873 1038 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 CBARPQ8N350 705 aaPredicted RBP5.3□□□□□ -1.56
CNOT2-216ENST00000548939 FAXDC2Q96IV6 333 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 VRK1Q99986 396 aaPredicted RBP5.3□□□□□ -1.56
CNOT2-216ENST00000548939 SEMA4CQ9C0C4 833 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 SMOC2Q9H3U7 446 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 ETAA1Q9NY74 926 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 DKK3Q9UBP4 350 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 PRKAB1Q9Y478 270 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 IFT140Q96RY7 1462 aa5.3□□□□□ -1.56
CNOT2-216ENST00000548939 ZNF785A8K8V0 405 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 TP73O15350 636 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 SOAT2O75908 522 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 GJB1P08034 283 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 NDUFB7P17568 137 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 CYP2C19P33261 490 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 PTGER1P34995 402 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 TBCCQ15814 346 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 KHDC1Q4VXA5 237 aaKnown RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 RBM20Q5T481 1227 aaKnown RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 C11orf87Q6NUJ2 197 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 TAF2Q6P1X5 1199 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 ZNF551Q7Z340 670 aaPredicted RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 TTC7BQ86TV6 843 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 PSD4Q8NDX1 1056 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 NSUN6Q8TEA1 469 aaKnown RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 COA7Q96BR5 231 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 NRIP3Q9NQ35 241 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms