RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 POU2F2P09086 479 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 BMP6P22004 513 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 PSMC2P35998 433 aaKnown RBP20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 PMS1P54277 932 aaKnown RBP20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 TRPC3Q13507 836 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 MORC3Q14149 939 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 CAMK4Q16566 473 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 SOWAHAQ2M3V2 549 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 C1orf220Q5T0J3 134 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 TDRD10Q5VZ19 366 aaKnown RBP20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 ANKRD40Q6AI12 368 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 FAM186BQ8IYM0 893 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 TMEM86AQ8N2M4 240 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 EEF2KMTQ96G04 330 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 ZCWPW1Q9H0M4 648 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 INSL5Q9Y5Q6 135 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 DOCK6Q96HP0 2047 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 IKBKBO14920 756 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 LRG1P02750 347 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 CD44P16070 742 aaKnown RBP20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 VAMP7P51809 220 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 MYL6P60660 151 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 NTHL1P78549 312 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 BIRC3Q13489 604 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 STIM1Q13586 685 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 SLC39A12Q504Y0 691 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 INTS8Q75QN2 995 aaKnown RBP20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 DPH6Q7L8W6 267 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 OTOP3Q7RTS5 596 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 LIMS2Q7Z4I7 341 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 TDRD5Q8NAT2 981 aaKnown RBP20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 ATAD1Q8NBU5 361 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 TSG101Q99816 390 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 CRISPLD1Q9H336 500 aa20.11■□□□□ 0.81
PRPF40B-206ENST00000547764 MTMR11A4FU01 709 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 TRIM49BA6NDI0 452 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 PSMA7O14818 248 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 CETN3O15182 167 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 N4BP1O75113 896 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 DUSP4Q13115 394 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 LRRTM3Q86VH5 581 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 OSTM1Q86WC4 334 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 ADGRF2Q8IZF7 708 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 SPATA18Q8TC71 538 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 ACSF2Q96CM8 615 aaPredicted RBP20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 DHTKD1Q96HY7 919 aaPredicted RBP20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 XYLT2Q9H1B5 865 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 EPHX3Q9H6B9 360 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 LMBRD1Q9NUN5 540 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 HCFC1R1Q9NWW0 138 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 DDX43Q9NXZ2 648 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 KIAA1468Q9P260 1216 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 DNMT3BQ9UBC3 853 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 MUTYHQ9UIF7 546 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 SLC27A5Q9Y2P5 690 aa20.1■□□□□ 0.81
PRPF40B-206ENST00000547764 PPP1R3GB7ZBB8 358 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 PI4K2BG5E9Z4 385 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 GABRDO14764 452 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 VNN1O95497 513 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 STAU1O95793 577 aaKnown RBP20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 TRIM49P0CI25 452 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 TRIM49CP0CI26 452 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 KRT13P13646 458 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 CCNE1P24864 410 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 ATICP31939 592 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 PPP1R2P41236 205 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 LHX1P48742 406 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 CDR1P51861 262 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 FKBP3Q00688 224 aaKnown RBP20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 LRRC63Q05C16 580 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 TWF1Q12792 350 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 NCOA4Q13772 614 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 WDR72Q3MJ13 1102 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 ZACNQ401N2 412 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 SV2AQ7L0J3 742 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 ZC3H3Q8IXZ2 948 aaKnown RBP20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 ZDHHC14Q8IZN3 488 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 PLCD3Q8N3E9 789 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 KBTBD7Q8WVZ9 684 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 SYAP1Q96A49 352 aaPredicted RBP20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 GBP4Q96PP9 640 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 ACBD6Q9BR61 282 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 MKNK1Q9BUB5 465 aa20.09■□□□□ 0.81
PRPF40B-206ENST00000547764 DCXO43602 365 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 HCRTO43612 131 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 EPB41P11171 864 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 FSHRP23945 695 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 ACAT1P24752 427 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 GBP2P32456 591 aaPredicted RBP20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 MCCD1P59942 119 aaPredicted RBP20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 MYL7Q01449 175 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 TSPY1Q01534 308 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 ENPEPQ07075 957 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 PABPC1LQ4VXU2 614 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 KLHL10Q6JEL2 608 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 GET4Q7L5D6 327 aaPredicted RBP20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 DCP1BQ8IZD4 617 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 TTC9BQ8N6N2 239 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 MYADMQ96S97 322 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms