RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 GZMAP12544 262 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 FGFR4P22455 802 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 OSTNP61366 133 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 GPC5P78333 572 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 GRIN2CQ14957 1233 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 ENOSF1Q7L5Y1 443 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 GSPT2Q8IYD1 628 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 DBF4BQ8NFT6 615 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 MYLIPQ8WY64 445 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 ELMO3Q96BJ8 720 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 FAM81BQ96LP2 452 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 CDX2Q99626 313 aaPredicted RBP17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 PI4K2AQ9BTU6 479 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 ZNF576Q9H609 170 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 ACP6Q9NPH0 428 aa17.67■□□□□ 0.42
CHMP1A-204ENST00000547687 POLR3GO15318 223 aaPredicted RBP17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 CHRNA1P02708 482 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 C4BPAP04003 597 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 CYP11B1P15538 503 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 WDR5P61964 334 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 GCNT1Q02742 428 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 ZACNQ401N2 412 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 TDRD10Q5VZ19 366 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 FAM117BQ6P1L5 589 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 CALR3Q96L12 384 aaKnown RBP17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 KRT12Q99456 494 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 CGRRF1Q99675 332 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 ACBD3Q9H3P7 528 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 PDZD7Q9H5P4 517 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 TMEM59LQ9UK28 342 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 COG5Q9UP83 839 aa17.66■□□□□ 0.42
CHMP1A-204ENST00000547687 TSPAN1O60635 241 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 ERLIN2O94905 339 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 MMEP08473 750 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 HADHBP55084 474 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 TNNC1P63316 161 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 FMO1Q01740 532 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 TCEAL1Q15170 157 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 WDR44Q5JSH3 913 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 OR5B17Q8NGF7 314 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 OSMRQ99650 979 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 GCOM2Q9BZD3 368 aaPredicted RBP17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 VIPAS39Q9H9C1 493 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 C1orf112Q9NSG2 853 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 CTTNBP2NLQ9P2B4 639 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 MSRAQ9UJ68 235 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 KRT5P13647 590 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 PDE6CP51160 858 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 CDC42EP1Q00587 391 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 CDR2Q01850 454 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 BIRC3Q13489 604 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 TERF2Q15554 542 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.65■□□□□ 0.421e-10■■□□□ 13.8
CHMP1A-204ENST00000547687 TMEM192Q8IY95 271 aa17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 AENQ8WTP8 325 aaKnown RBP17.65■□□□□ 0.42
CHMP1A-204ENST00000547687 ANK1P16157 1881 aa17.64■□□□□ 0.42
CHMP1A-204ENST00000547687 H3BQF6 201 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 PGRMC1O00264 195 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 ARHGEF15O94989 841 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 HLA-DRAP01903 254 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 GHRP10912 638 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 SPRED2Q7Z698 418 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 IFT20Q8IY31 132 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 RASGEF1CQ8N431 466 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 GDAP1L1Q96MZ0 367 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 CERS4Q9HA82 394 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 VNN1O95497 513 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 CA3P07451 260 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 MCF2P10911 925 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 TNFRSF8P28908 595 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 PIK3CAP42336 1068 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 CDY2AQ9Y6F7 541 aa17.64■□□□□ 0.41
CHMP1A-204ENST00000547687 A0A1B0GUA9 196 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 DDX3YO15523 660 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 GLI1P08151 1106 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 CXCL8P10145 99 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 DARSP14868 501 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 IKBKEQ14164 716 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 TAF2Q6P1X5 1199 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 WDR49Q8IV35 697 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 HERC6Q8IVU3 1022 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 KLHL7Q8IXQ5 586 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 DDX1Q92499 740 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 PRDM12Q9H4Q4 367 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 HPCAL4Q9UM19 191 aa17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 NOC2LQ9Y3T9 749 aaKnown RBP17.63■□□□□ 0.41
CHMP1A-204ENST00000547687 BAIAP3O94812 1187 aa17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 HEXIM1O94992 359 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 PARNO95453 639 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 STAG3L1P0CL83 205 aa17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 EIF4BP23588 611 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 MGAT3Q09327 533 aa17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 RAB30Q15771 203 aa17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 SCARA3Q6AZY7 606 aa17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 CATSPER4Q7RTX7 472 aa17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 TMEM40Q8WWA1 233 aa17.62■□□□□ 0.41
CHMP1A-204ENST00000547687 SLC9A7Q96T83 725 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms