RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	UBE4B	O95155	1302 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	SRRM3	A6NNA2	597 aa	Predicted RBP	13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	TNFSF9	P41273	254 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	CDH8	P55286	799 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	BNIP1	Q12981	228 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	PTK6	Q13882	451 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	NETO2	Q8NC67	525 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	ACTL9	Q8TC94	416 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	MORC4	Q8TE76	937 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	FAM151A	Q8WW52	585 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	NLRP4	Q96MN2	994 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	FAM111A	Q96PZ2	611 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	P4HA2	O15460	535 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	AVIL	O75366	819 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	GSTA1	P08263	222 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	MAN1A1	P33908	653 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	CTCF	P49711	727 aa	Predicted RBP	13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	BPIFB4	P59827	614 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	KDSR	Q06136	332 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	CUL2	Q13617	745 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	ALCAM	Q13740	583 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	NLRP9	Q7RTR0	991 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	ZNF606	Q8WXB4	792 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	SLC7A3	Q8WY07	619 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	SENP7	Q9BQF6	1050 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	PTPRJ	Q12913	1337 aa		13.69	□□□□□ -0.22
BRF1-210	ENST00000547374	INO80B-WBP1	J3KQ70	363 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	SLC26A4	O43511	780 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	CST3	P01034	146 aa	Predicted RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	MYCN	P04198	464 aa	Predicted RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	CCND1	P24385	295 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	MYL6	P60660	151 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	CASC4	Q6P4E1	433 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	PDCD7	Q8N8D1	485 aa	Known RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	TCP10L	Q8TDR4	215 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	STMN2	Q93045	179 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	TBC1D10A	Q9BXI6	508 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	INO80B	Q9C086	356 aa	Predicted RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	APOBEC3G	Q9HC16	384 aa	Known RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	SLC17A7	Q9P2U7	560 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	HEY2	Q9UBP5	337 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	SLC9A2	Q9UBY0	812 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	CHKB	Q9Y259	395 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	GYG2	O15488	501 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	MMP14	P50281	582 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	GPC3	P51654	580 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	OTUD4	Q01804	1114 aa	Known RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	MTFR1	Q15390	333 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	ANKRD22	Q5VYY1	191 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	BZW1	Q7L1Q6	419 aa	Known RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	SAMD7	Q7Z3H4	446 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	CCDC125	Q86Z20	511 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	ZNF570	Q96NI8	536 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	USH1C	Q9Y6N9	552 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	IVD	P26440	423 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	PPP2R5D	Q14738	602 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	WLS	Q5T9L3	541 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	DARS2	Q6PI48	645 aa	Known RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	FBXO36	Q8NEA4	188 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	DDX1	Q92499	740 aa	Known RBP	13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	PARVA	Q9NVD7	372 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	DONSON	Q9NYP3	566 aa		13.68	□□□□□ -0.22
BRF1-210	ENST00000547374	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	GJB1	P08034	283 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	INHBA	P08476	426 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	TMEM191B	P0C7N4	346 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	KRT76	Q01546	638 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	CCNG2	Q16589	344 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	CGB2	Q6NT52	195 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	MAP4K3	Q8IVH8	894 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	BBOF1	Q8ND07	529 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	JPH1	Q9HDC5	661 aa	Predicted RBP	13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	COX16	Q9P0S2	106 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	MYPN	Q86TC9	1320 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	UNC5C	O95185	931 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	CD48	P09326	243 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	RASSF2	P50749	326 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	MFSD5	Q6N075	450 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	RFWD2	Q8NHY2	731 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	JDP2	Q8WYK2	163 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	GPATCH2L	Q9NWQ4	482 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	TRPC5	Q9UL62	973 aa	Predicted RBP	13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	FAM155B	O75949	473 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	EGFR	P00533	1210 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	GDF10	P55107	478 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	ACTR2	P61160	394 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	PSMC1	P62191	440 aa	Known RBP	13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	BMPR2	Q13873	1038 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	TAF5	Q15542	800 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	NPNT	Q6UXI9	565 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	ABRA	Q8N0Z2	381 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	SLC25A41	Q8N5S1	370 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	CFAP61	Q8NHU2	1237 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	VTI1A	Q96AJ9	217 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	TTC1	Q99614	292 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	CYP26B1	Q9NR63	512 aa		13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	G3BP2	Q9UN86	482 aa	Known RBP	13.67	□□□□□ -0.22
BRF1-210	ENST00000547374	LPXN	O60711	386 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms