RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 KYNUQ16719 465 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 MFSD7Q6UXD7 560 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 TMEM35BQ8NCS4 154 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 GBA2Q9HCG7 927 aaPredicted RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 KCNG1Q9UIX4 513 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 KCNH4Q9UQ05 1017 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 ADCY6O43306 1168 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 MYL3P08590 195 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 TBXAS1P24557 533 aaPredicted RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 MBTD1Q05BQ5 628 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 TAF5Q15542 800 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 RAB6CQ53S08 254 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 ZPBP2Q6X784 338 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 WDR49Q8IV35 697 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 ATP6V1G3Q96LB4 118 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 RAB6CQ9H0N0 254 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 GOLGA2P5Q9HBQ8 144 aa13.48□□□□□ -0.25
SCAF11-209ENST00000547018 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
SCAF11-209ENST00000547018 CTSHP09668 335 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 CHRNA3P32297 505 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 OGDHQ02218 1023 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 LRRC14Q15048 493 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 OR6B2Q6IFH4 312 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 GLIS1Q8NBF1 620 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 FEZF2Q8TBJ5 459 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 RAPGEF5Q92565 580 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 VTI1AQ96AJ9 217 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 RPS6KC1Q96S38 1066 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 TMEM134Q9H6X4 195 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 METTL5Q9NRN9 209 aaKnown RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 CALCOCO1Q9P1Z2 691 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 ADGRA2Q96PE1 1338 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 PASKQ96RG2 1323 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 C22orf31O95567 290 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 SNAI1O95863 264 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 CHKAP35790 457 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 IFI35P80217 286 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 LAMC2Q13753 1193 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 GRIK4Q16099 956 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 SH3PXD2AQ5TCZ1 1133 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 ACOT1Q86TX2 421 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 DNAJB3Q8WWF6 145 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 PTPN18Q99952 460 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 SDCBP2Q9H190 292 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 MRPL47Q9HD33 250 aaKnown RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 GPATCH2LQ9NWQ4 482 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 DNAJC25-GNG10A0A024R161 153 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 PROSCO94903 275 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 CETPP11597 493 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 RABGGTBP53611 331 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 DUPD1Q68J44 220 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 TAPT1Q6NXT6 567 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 C2orf69Q8N8R5 385 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 ANKRD42Q8N9B4 389 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 PAIP2Q9BPZ3 127 aaKnown RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 ADPGKQ9BRR6 497 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 C2orf40Q9H1Z8 148 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 KCNK9Q9NPC2 374 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 NGRNQ9NPE2 291 aaKnown RBP13.47□□□□□ -0.25
SCAF11-209ENST00000547018 PARVAQ9NVD7 372 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 CTNNAL1Q9UBT7 734 aa13.47□□□□□ -0.25
SCAF11-209ENST00000547018 ZNFX1Q9P2E3 1918 aaKnown RBP13.46□□□□□ -0.25
SCAF11-209ENST00000547018 SGK1O00141 431 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 BANF1O75531 89 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 KRT3P12035 628 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 HSPA9P38646 679 aaKnown RBP13.46□□□□□ -0.25
SCAF11-209ENST00000547018 CCDC142Q17RM4 750 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 RNF187Q5TA31 235 aaPredicted RBP13.46□□□□□ -0.25
SCAF11-209ENST00000547018 RHOT1Q8IXI2 618 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 SIX4Q9UIU6 781 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 RGPD3A6NKT7 1758 aaPredicted RBP13.46□□□□□ -0.25
SCAF11-209ENST00000547018 RGPD4Q7Z3J3 1758 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 IQCA1LA6NCM1 817 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 TULP2O00295 520 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 ITGA8P53708 1063 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 TNFAIP2Q03169 654 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 CENPCQ03188 943 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 ACVR2BQ13705 512 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 TMEM132DQ14C87 1099 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 SLC10A6Q3KNW5 377 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 PTPN20Q4JDL3 420 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 FAM102AQ5T9C2 384 aaPredicted RBP13.46□□□□□ -0.25
SCAF11-209ENST00000547018 ACAP3Q96P50 834 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 CPXM1Q96SM3 734 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 TMEM121Q9BTD3 319 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
SCAF11-209ENST00000547018 ANAPC5Q9UJX4 755 aa13.46□□□□□ -0.25
SCAF11-209ENST00000547018 DNPEPQ9ULA0 475 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms