RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FBXL13Q8NEE6 735 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.53■□□□□ 0.08
DDX54-203ENST00000546869 ENOX1Q8TC92 643 aaKnown RBP15.53■□□□□ 0.08
DDX54-203ENST00000546869 ASB2Q96Q27 587 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 RTP3Q9BQQ7 232 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 ADAM7Q9H2U9 754 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 THAP9Q9H5L6 903 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 SFXN1Q9H9B4 322 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 ZDHHC7Q9NXF8 308 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 AFF4Q9UHB7 1163 aaKnown RBP15.53■□□□□ 0.08
DDX54-203ENST00000546869 SCN1AP35498 2009 aa15.53■□□□□ 0.08
DDX54-203ENST00000546869 WDR27A2RRH5 827 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 ZMYND10O75800 440 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 HLA-DRAP01903 254 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 P4HA1P13674 534 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 WARSP23381 471 aaKnown RBP15.52■□□□□ 0.08
DDX54-203ENST00000546869 MXI1P50539 228 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 SMAD4Q13485 552 aaKnown RBP15.52■□□□□ 0.08
DDX54-203ENST00000546869 STX1AQ16623 288 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 ZNF699Q32M78 642 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 ZNF667Q5HYK9 610 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 CAVIN1Q6NZI2 390 aaKnown RBP15.52■□□□□ 0.08
DDX54-203ENST00000546869 EP400NLQ6ZTU2 488 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 CCDC149Q6ZUS6 474 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 IRF2BP1Q8IU81 584 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.52■□□□□ 0.08
DDX54-203ENST00000546869 TAS1R2Q8TE23 839 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 SUSD6Q92537 303 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 ZCWPW1Q9H0M4 648 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 FAM124BQ9H5Z6 455 aaPredicted RBP15.52■□□□□ 0.08
DDX54-203ENST00000546869 MAN1C1Q9NR34 630 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 RAB20Q9NX57 234 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 FAM50BQ9Y247 325 aa15.52■□□□□ 0.08
DDX54-203ENST00000546869 GRXCR2A6NFK2 248 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 H3BQ06 376 aaPredicted RBP15.51■□□□□ 0.07
DDX54-203ENST00000546869 MBTPS2O43462 519 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 N4BP1O75113 896 aaKnown RBP15.51■□□□□ 0.07
DDX54-203ENST00000546869 HNRNPA1P09651 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
DDX54-203ENST00000546869 TNNC1P63316 161 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 MYL7Q01449 175 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 TFF2Q03403 129 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 TCERG1LQ5VWI1 586 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 FAM114A1Q8IWE2 563 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 DCP1BQ8IZD4 617 aaKnown RBP15.51■□□□□ 0.07
DDX54-203ENST00000546869 ADGRF2Q8IZF7 708 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 CCDC150Q8NCX0 1101 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 OR10T2Q8NGX3 314 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 C2orf15Q8WU43 125 aaKnown RBP15.51■□□□□ 0.07
DDX54-203ENST00000546869 KBTBD7Q8WVZ9 684 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 MMS19Q96T76 1030 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 IMPG2Q9BZV3 1241 aa15.51■□□□□ 0.07
DDX54-203ENST00000546869 DDX43Q9NXZ2 648 aaKnown RBP15.51■□□□□ 0.07
DDX54-203ENST00000546869 BMP1P13497 986 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 CPB1P15086 417 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 PCSK1P29120 753 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 PIK3CAP42336 1068 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 FMO5P49326 533 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 CETN1Q12798 172 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 SMAD2Q15796 467 aaKnown RBP15.5■□□□□ 0.07
DDX54-203ENST00000546869 TPD52L1Q16890 204 aaPredicted RBP15.5■□□□□ 0.07
DDX54-203ENST00000546869 CBWD6Q4V339 395 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 DCAF17Q5H9S7 520 aaPredicted RBP15.5■□□□□ 0.07
DDX54-203ENST00000546869 CBWD3Q5JTY5 395 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 CBWD5Q5RIA9 395 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 CES5AQ6NT32 575 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 GPR149Q86SP6 731 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 NECTIN4Q96NY8 510 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 BCO2Q9BYV7 579 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 CYP3A43Q9HB55 503 aa15.5■□□□□ 0.07
DDX54-203ENST00000546869 NXF1Q9UBU9 619 aaKnown RBP15.5■□□□□ 0.07
DDX54-203ENST00000546869 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.5■□□□□ 0.07
DDX54-203ENST00000546869 SPATA31D3P0C874 917 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 ELF1P32519 619 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 GNL1P36915 607 aaPredicted RBP15.49■□□□□ 0.07
DDX54-203ENST00000546869 TSPY1Q01534 308 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 TYRO3Q06418 890 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 KCNH2Q12809 1159 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 NFE2Q16621 373 aaPredicted RBP15.49■□□□□ 0.07
DDX54-203ENST00000546869 WDR44Q5JSH3 913 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 TJAP1Q5JTD0 557 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 ATAT1Q5SQI0 421 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 PTCRAQ6ISU1 281 aaPredicted RBP15.49■□□□□ 0.07
DDX54-203ENST00000546869 FAM171BQ6P995 826 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 RNF19BQ6ZMZ0 732 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 SPATA31D4Q6ZUB0 917 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 LRRTM3Q86VH5 581 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 OSTM1Q86WC4 334 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 SEMA4DQ92854 862 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 CNOT6LQ96LI5 555 aaKnown RBP15.49■□□□□ 0.07
DDX54-203ENST00000546869 RIPOR3Q96MK2 946 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 PKMYT1Q99640 499 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 BPIFA3Q9BQP9 254 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 PRKD2Q9BZL6 878 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 CDH9Q9ULB4 789 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 COL6A3P12111 3177 aa15.49■□□□□ 0.07
DDX54-203ENST00000546869 CCDC195A0A1B0GUA6 201 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 MTMR11A4FU01 709 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 VNN2O95498 520 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms