RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 SPATA18Q8TC71 538 aa12□□□□□ -0.49
TROAP-204ENST00000546776 ZNF558Q96NG5 402 aa12□□□□□ -0.49
TROAP-204ENST00000546776 PANX2Q96RD6 677 aa12□□□□□ -0.49
TROAP-204ENST00000546776 BCO2Q9BYV7 579 aa12□□□□□ -0.49
TROAP-204ENST00000546776 ABHD10Q9NUJ1 306 aa12□□□□□ -0.49
TROAP-204ENST00000546776 STK39Q9UEW8 545 aa12□□□□□ -0.49
TROAP-204ENST00000546776 PRG3Q9Y2Y8 225 aaPredicted RBP12□□□□□ -0.49
TROAP-204ENST00000546776 LRRC53A6NM62 1247 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 CYB561D2O14569 222 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 NRP1O14786 923 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 PPEF2O14830 753 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 NCK2O43639 380 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 KIF4AO95239 1232 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 GALTP07902 379 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 KRT5P13647 590 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 ASPAP45381 313 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 AARSP49588 968 aaKnown RBP eCLIP11.99□□□□□ -0.49
TROAP-204ENST00000546776 ADKP55263 362 aaKnown RBP11.99□□□□□ -0.49
TROAP-204ENST00000546776 BCAR1P56945 870 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 JAM2P57087 298 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 ARID5BQ14865 1188 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 KLHL23Q8NBE8 558 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 COLGALT1Q8NBJ5 622 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 SHC3Q92529 594 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 BAP1Q92560 729 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 KREMEN1Q96MU8 473 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 DNAJC7Q99615 494 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 SNX25Q9H3E2 840 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 NSUN3Q9H649 340 aaKnown RBP11.99□□□□□ -0.49
TROAP-204ENST00000546776 CISHQ9NSE2 258 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 AIPL1Q9NZN9 384 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 THEGQ9P2T0 379 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 DNAJB4Q9UDY4 337 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 ADAM28Q9UKQ2 775 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 COG5Q9UP83 839 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
TROAP-204ENST00000546776 BZW2Q9Y6E2 419 aaKnown RBP11.99□□□□□ -0.49
TROAP-204ENST00000546776 SF3B1O75533 1304 aaKnown RBP eCLIP11.99□□□□□ -0.49
TROAP-204ENST00000546776 CHD7Q9P2D1 2997 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 TACC1O75410 805 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 LINC00271P0C7V0 271 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 CD58P19256 250 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 HNRNPH3P31942 346 aaKnown RBP11.98□□□□□ -0.49
TROAP-204ENST00000546776 LHX1P48742 406 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 SLC11A1P49279 550 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 PTK2Q05397 1052 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 INCA1Q0VD86 236 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 SCARA3Q6AZY7 606 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 PDE12Q6L8Q7 609 aaKnown RBP11.98□□□□□ -0.49
TROAP-204ENST00000546776 TMEM270Q6UE05 265 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 KCNT2Q6UVM3 1135 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 VPS36Q86VN1 386 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 UNC93AQ86WB7 457 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 ADGRF2Q8IZF7 708 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 TC2NQ8N9U0 490 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 C3orf58Q8NDZ4 430 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 ATXN2LQ8WWM7 1075 aaKnown RBP11.98□□□□□ -0.49
TROAP-204ENST00000546776 KAT5Q92993 513 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 TRIM44Q96DX7 344 aaPredicted RBP11.98□□□□□ -0.49
TROAP-204ENST00000546776 SUSD3Q96L08 255 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 SENP8Q96LD8 212 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 ARID3AQ99856 593 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 PAAF1Q9BRP4 392 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 CWH43Q9H720 699 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 SMYD3Q9H7B4 428 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 ALG13Q9NP73 1137 aaKnown RBP11.98□□□□□ -0.49
TROAP-204ENST00000546776 SPG21Q9NZD8 308 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 CACNG4Q9UBN1 327 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 AJAP1Q9UKB5 411 aaPredicted RBP11.98□□□□□ -0.49
TROAP-204ENST00000546776 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 COL6A3P12111 3177 aa11.98□□□□□ -0.49
TROAP-204ENST00000546776 KIAA1671Q9BY89 1806 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 CDH23Q9H251 3354 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 M0QZQ0 153 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 FOXN3O00409 490 aaPredicted RBP11.97□□□□□ -0.49
TROAP-204ENST00000546776 SYN3O14994 580 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 SPTLC1O15269 473 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 GRM6O15303 877 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 FGF18O76093 207 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 GFPT2O94808 682 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 SERPING1P05155 500 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 ITGB1P05556 798 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 WEE2P0C1S8 567 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 TYMPP19971 482 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 GNL1P36915 607 aaPredicted RBP11.97□□□□□ -0.49
TROAP-204ENST00000546776 PDE6CP51160 858 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 ARID5AQ03989 594 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 KLHL30Q0D2K2 578 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 SOWAHAQ2M3V2 549 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 TMTC1Q8IUR5 882 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 FAM71AQ8IYT1 594 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 TMEM130Q8N3G9 435 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 RBBP8NLQ8NC74 664 aaPredicted RBP11.97□□□□□ -0.49
TROAP-204ENST00000546776 OR6B3Q8NGW1 331 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 SPPL3Q8TCT6 385 aa11.97□□□□□ -0.49
TROAP-204ENST00000546776 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms