RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 C20orf96Q9NUD7 363 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-212ENST00000546744 DKK3Q9UBP4 350 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 DCDC2Q9UHG0 476 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 AFF2P51816 1311 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 SPATA31A6Q5VVP1 1343 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 AIM2O14862 343 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 NUDT17P0C025 328 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 MYL2P10916 166 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 PEX3P56589 373 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 C21orf59P57076 290 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 VPS72Q15906 364 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 LUZP2Q86TE4 346 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 NDUFAF2Q8N183 169 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 MARCH10Q8NA82 808 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-212ENST00000546744 CNDP1Q96KN2 507 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 C1orf50Q9BV19 199 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 RAD21L1Q9H4I0 556 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 POLD4Q9HCU8 107 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 SLC13A4Q9UKG4 626 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 SKAP2O75563 359 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-212ENST00000546744 AP1G2O75843 785 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 TNFAIP2Q03169 654 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 SNX17Q15036 470 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 EPHA7Q15375 998 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 RPF1Q9H9Y2 349 aaKnown RBP13.37□□□□□ -0.27
PTCH1-212ENST00000546744 MYRFQ9Y2G1 1151 aa13.37□□□□□ -0.27
PTCH1-212ENST00000546744 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-212ENST00000546744 MTSS1O43312 755 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 GSNP06396 782 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 GTF2IP78347 998 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CCNG2Q16589 344 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CWF19L1Q69YN2 538 aaKnown RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 AAGABQ6PD74 315 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 ZNF786Q8N393 782 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 ZNF513Q8N8E2 541 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CALML6Q8TD86 181 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 RBBP8Q99708 897 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 SMARCAL1Q9NZC9 954 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 NXF1Q9UBU9 619 aaKnown RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 XPO7Q9UIA9 1087 aaKnown RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 UTYO14607 1347 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 RIPK2O43353 540 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 RFC5P40937 340 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 MYBPC2Q14324 1141 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 DLGAP5Q15398 846 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CHI3L2Q15782 390 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 KYAT1Q16773 422 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 SBK1Q52WX2 424 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 EPHA10Q5JZY3 1008 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 TMC5Q6UXY8 1006 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CATSPER3Q86XQ3 398 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 SCFD1Q8WVM8 642 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CKAP2Q8WWK9 683 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 TMA16Q96EY4 203 aaKnown RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 TLR10Q9BXR5 811 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 HEY1Q9Y5J3 304 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 STRCP1A6NGW2 1772 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 ASNA1O43681 348 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PYGLP06737 847 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 BTKQ06187 659 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 ZNF746Q6NUN9 644 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 MTDHQ86UE4 582 aaKnown RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 NDEL1Q9GZM8 345 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 SEC24DO94855 1032 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PSMG1O95456 288 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 CYP19A1P11511 503 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 ALADP13716 330 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 NPR1P16066 1061 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 MLH1P40692 756 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 FASTKD1Q53R41 847 aaKnown RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PPP6R3Q5H9R7 873 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-212ENST00000546744 DCAF15Q66K64 600 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PLEKHA7Q6IQ23 1121 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 TMEM179Q6ZVK1 233 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 P3H2Q8IVL5 708 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 COG4Q9H9E3 785 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PI4KBQ9UBF8 816 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
PTCH1-212ENST00000546744 MYMKA6NI61 221 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 KCNQ2O43526 872 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 NPTXRO95502 500 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 SOX6P35712 828 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 CSTF3Q12996 717 aaKnown RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 BLMHQ13867 455 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 UBE2SQ16763 222 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 TAF2Q6P1X5 1199 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 MYLK4Q86YV6 388 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 ANKMY2Q8IV38 441 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
PTCH1-212ENST00000546744 TRIM45Q9H8W5 580 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-212ENST00000546744 DCP1AQ9NPI6 582 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms