RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 C11orf49Q9H6J7 331 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 AGO3Q9H9G7 860 aaKnown RBP8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 RSAD1Q9HA92 442 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 CYP3A43Q9HB55 503 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 MYO1AQ9UBC5 1043 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 AGAP1Q9UPQ3 857 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 HES2Q9Y543 173 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 PCDHB4Q9Y5E5 795 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 SCN1AP35498 2009 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 MICAL3Q7RTP6 2002 aa8.35□□□□□ -1.07
TSPAN8-203ENST00000546561 UMODL1Q5DID0 1318 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 SCN5AQ14524 2016 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 SMIM28A0A1B0GU29 152 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 LILRB3O75022 631 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 DXOO77932 396 aaKnown RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 EOMESO95936 686 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 CST3P01034 146 aaPredicted RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 THP07101 528 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 PAX3P23760 479 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 MAGEA1P43355 309 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 GFPT1Q06210 699 aaPredicted RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 GRIK3Q13003 919 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 DSC3Q14574 896 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 IFI16Q16666 785 aaKnown RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 ASTE1Q2TB18 679 aaPredicted RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 WDR72Q3MJ13 1102 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 SV2CQ496J9 727 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 GLRA4Q5JXX5 417 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 SPOPLQ6IQ16 392 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 TMEM270Q6UE05 265 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 ALKAL1Q6UXT8 129 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 TRIM72Q6ZMU5 477 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 SLC24A5Q71RS6 500 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 ZNF571Q7Z3V5 609 aaPredicted RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 NECAB2Q7Z6G3 386 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 MRPL10Q7Z7H8 261 aaKnown RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 C17orf53Q8N3J3 647 aaPredicted RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 URGCPQ8TCY9 931 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 KAT5Q92993 513 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 C16orf45Q96MC5 204 aaPredicted RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 AGPAT1Q99943 283 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 PDCL3Q9H2J4 239 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 HIPK3Q9H422 1215 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 APOBEC3GQ9HC16 384 aaKnown RBP8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 RGS18Q9NS28 235 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 ADAMTS1Q9UHI8 967 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 NUB1Q9Y5A7 615 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
TSPAN8-203ENST00000546561 CEP350Q5VT06 3117 aa8.34□□□□□ -1.08
TSPAN8-203ENST00000546561 ARHGEF37A1IGU5 675 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 USP27XA6NNY8 438 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 CYP26A1O43174 497 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 MED7O43513 233 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 CLTBP09497 229 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 PNMA6AP0CW24 399 aaPredicted RBP8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 COL6A1P12109 1028 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 TNNT1P13805 278 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 CYP11B1P15538 503 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 LRPAP1P30533 357 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 GNA15P30679 374 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 RFC2P35250 354 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 MLH1P40692 756 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 ASPAP45381 313 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 TAF6P49848 677 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 CDR2Q01850 454 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 NAB2Q15742 525 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 ZBTB6Q15916 424 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 TRIM60Q495X7 471 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 PLEKHG4Q58EX7 1191 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 C9orf57Q5W0N0 161 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 ALKBH5Q6P6C2 394 aaKnown RBP8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 GLB1LQ6UWU2 654 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 SCARA5Q6ZMJ2 495 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 ECHDC2Q86YB7 292 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 REXO1L1PQ8IX06 675 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 RBBP8NLQ8NC74 664 aaPredicted RBP8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 RNF169Q8NCN4 708 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 EPS8L1Q8TE68 723 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 TSC1Q92574 1164 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 TRIM11Q96F44 468 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 FAM84AQ96KN4 292 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 CALR3Q96L12 384 aaKnown RBP8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 UROC1Q96N76 676 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 ZMAT2Q96NC0 199 aaKnown RBP8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 ALS2CR12Q96Q35 445 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 PPP1R10Q96QC0 940 aaKnown RBP8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 MMS19Q96T76 1030 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 BCO2Q9BYV7 579 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 XYLT2Q9H1B5 865 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 LZTFL1Q9NQ48 299 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 PRDM10Q9NQV6 1147 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 CISHQ9NSE2 258 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 TUBGCP4Q9UGJ1 667 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 SIX4Q9UIU6 781 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 NAGPAQ9UK23 515 aa8.33□□□□□ -1.08
TSPAN8-203ENST00000546561 INTUQ9ULD6 942 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms