RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 SCN1AP35498 2009 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 MED7O43513 233 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 ALDH1A1P00352 501 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 C6orf222P0C671 652 aaPredicted RBP16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 TNNT3P45378 269 aaPredicted RBP16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 PTPN11Q06124 597 aaPredicted RBP16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 PAK2Q13177 524 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 NNTQ13423 1086 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 SIX1Q15475 284 aaPredicted RBP16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 XKR4Q5GH76 650 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 PPP1R15BQ5SWA1 713 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 EMBQ6PCB8 327 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 SLC13A5Q86YT5 568 aaPredicted RBP16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 SMC1BQ8NDV3 1235 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 CCDC26Q8TAB7 109 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 TMEM176AQ96HP8 235 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 PLEKHA4Q9H4M7 779 aa16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.19■□□□□ 0.18
CALCOCO1-203ENST00000546443 GOLGA6L10A0A0M3HER8 536 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 TMEM191CA6NGB0 347 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 H3BQF6 201 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 PHF2O75151 1096 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 GJB6O95452 261 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 CD19P15391 556 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 FLT3LGP49771 235 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 TRADDQ15628 312 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 CYP1B1Q16678 543 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 MAATS1Q7Z4T9 603 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 TTC39CQ8N584 583 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 PRELID2Q8N945 189 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 SEC14L1Q92503 715 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 NXF3Q9H4D5 531 aaKnown RBP16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 ST7Q9NRC1 585 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 AMACRQ9UHK6 382 aa16.18■□□□□ 0.18
CALCOCO1-203ENST00000546443 ESYT3A0FGR9 886 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 FSCN2O14926 492 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 TLR3O15455 904 aaKnown RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 RECQL4O94761 1208 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 VDRP11473 427 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 OAS2P29728 719 aaKnown RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 YARSP54577 528 aaKnown RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 GSCP56915 257 aaPredicted RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 CAP1Q01518 475 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 TAF2Q6P1X5 1199 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 ERICH1Q86X53 443 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 BEST2Q8NFU1 509 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 IP6K2Q9UHH9 426 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 CYTH4Q9UIA0 394 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 BARX2Q9UMQ3 279 aaPredicted RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 NFU1Q9UMS0 254 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 PIN4Q9Y237 131 aaKnown RBP16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 HES2Q9Y543 173 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 CEP83Q9Y592 693 aa16.17■□□□□ 0.18
CALCOCO1-203ENST00000546443 A0A0U1RQG5 324 aaPredicted RBP16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 TCRBV7S2A1N4TA0A589 114 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 TTI1O43156 1089 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 SEPT4O43236 478 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 MICAL2O94851 1124 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 ECHS1P30084 290 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 PTGIRP43119 386 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 AARSP49588 968 aaKnown RBP eCLIP16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 TAS2R40P59535 323 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 RPL7AP62424 266 aaKnown RBP16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 TAP1Q03518 808 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 PRKCZQ05513 592 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 ZNF252P-AS1Q0IIN9 211 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 TRIM32Q13049 653 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 ORC1Q13415 861 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 CUL1Q13616 776 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 CNGA2Q16280 664 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 PTPN20Q4JDL3 420 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 GNASQ5JWF2 1037 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 FAM228AQ86W67 206 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 LRRC52Q8N7C0 313 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 IFT81Q8WYA0 676 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 GDAP1L1Q96MZ0 367 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 TSPAN18Q96SJ8 248 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 ACBD3Q9H3P7 528 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 TUBGCP4Q9UGJ1 667 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 SRCAPQ6ZRS2 3230 aa16.16■□□□□ 0.18
CALCOCO1-203ENST00000546443 O00370 1275 aa16.15■□□□□ 0.18
CALCOCO1-203ENST00000546443 PPEF2O14830 753 aa16.15■□□□□ 0.18
CALCOCO1-203ENST00000546443 PSTPIP1O43586 416 aa16.15■□□□□ 0.18
CALCOCO1-203ENST00000546443 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
CALCOCO1-203ENST00000546443 PGK1P00558 417 aa16.15■□□□□ 0.18
CALCOCO1-203ENST00000546443 FAM153BP0C7A2 387 aa16.15■□□□□ 0.18
CALCOCO1-203ENST00000546443 RARAP10276 462 aa16.15■□□□□ 0.18
CALCOCO1-203ENST00000546443 KCNE1P15382 129 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms