RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ZBTB41Q5SVQ8 909 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 TLDC1Q6P9B6 456 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 LDHDQ86WU2 507 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 PPM1NQ8N819 430 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 L3MBTL3Q96JM7 780 aaPredicted RBP15.46■□□□□ 0.07
HOXC11-202ENST00000546378 SGIP1Q9BQI5 828 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 TRAIPQ9BWF2 469 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.46■□□□□ 0.07
HOXC11-202ENST00000546378 IVNS1ABPQ9Y6Y0 642 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 CNTNAP1P78357 1384 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 NRXN2Q9P2S2 1712 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 A0A0A6YYK5 440 aaPredicted RBP15.46■□□□□ 0.07
HOXC11-202ENST00000546378 PAEPP09466 180 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 MSX2P35548 267 aaPredicted RBP15.46■□□□□ 0.07
HOXC11-202ENST00000546378 CAP2P40123 477 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 CASC4Q6P4E1 433 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 ALYREFQ86V81 257 aaKnown RBP15.46■□□□□ 0.07
HOXC11-202ENST00000546378 FBXL13Q8NEE6 735 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 ATL2Q8NHH9 583 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 TCP10LQ8TDR4 215 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 MKL1Q969V6 931 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 SYT15Q9BQS2 421 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 THTPAQ9BU02 230 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 DCLK3Q9C098 648 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 SLC5A4Q9NY91 659 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 HEY1Q9Y5J3 304 aa15.46■□□□□ 0.07
HOXC11-202ENST00000546378 FAM237BA0A1B0GVD1 139 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 ZMPSTE24O75844 475 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 FGFR1P11362 822 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 SAT1P21673 171 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 BRD2P25440 801 aaKnown RBP15.46■□□□□ 0.06
HOXC11-202ENST00000546378 MARK3P27448 753 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 LIG4P49917 911 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 GPR162Q16538 588 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 MAPK6Q16659 721 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 KRT39Q6A163 491 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 WRNIP1Q96S55 665 aa15.46■□□□□ 0.06
HOXC11-202ENST00000546378 SYNJ2BP-COX16A0A087WUM0 186 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 ZBTB48P10074 688 aaPredicted RBP15.45■□□□□ 0.06
HOXC11-202ENST00000546378 BTKQ06187 659 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 OTOAQ7RTW8 1153 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 RSAD2Q8WXG1 361 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 ARL8BQ9NVJ2 186 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 COX16Q9P0S2 106 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 PCDHA3Q9Y5H8 950 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 hCG_1984214I3L0E3 225 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 SNHG28P0DPA3 235 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 DMP1Q13316 513 aaPredicted RBP15.45■□□□□ 0.06
HOXC11-202ENST00000546378 AP3B2Q13367 1082 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 MTMR1Q13613 665 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 TTLL12Q14166 644 aaPredicted RBP15.45■□□□□ 0.06
HOXC11-202ENST00000546378 RSPH3Q86UC2 560 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 ZNF713Q8N859 430 aaPredicted RBP15.45■□□□□ 0.06
HOXC11-202ENST00000546378 FAM71DQ8N9W8 422 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 ANKLE1Q8NAG6 615 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 C1orf131Q8NDD1 294 aaKnown RBP15.45■□□□□ 0.06
HOXC11-202ENST00000546378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.45■□□□□ 0.06
HOXC11-202ENST00000546378 TJP2Q9UDY2 1190 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 LRRC37AA6NMS7 1700 aa15.45■□□□□ 0.06
HOXC11-202ENST00000546378 NAV1Q8NEY1 1877 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 ASNSP08243 561 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 GNA15P30679 374 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 NT5C2P49902 561 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 ZNF268Q14587 947 aaPredicted RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 SNX30Q5VWJ9 437 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 SWSAP1Q6NVH7 229 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 CCDC62Q6P9F0 684 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 C1orf228Q6PIY5 440 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 TRMT10CQ7L0Y3 403 aaKnown RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 SHKBP1Q8TBC3 707 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 ZNF483Q8TF39 744 aaPredicted RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 SYT17Q9BSW7 474 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 TXLNGYQ9BZA5 131 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 TRIM4Q9C037 500 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 A1CFQ9NQ94 594 aaKnown RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 IL1RAPL1Q9NZN1 696 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 GABBR1Q9UBS5 961 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 PCYOX1Q9UHG3 505 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 C2CD2Q9Y426 696 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 ITIH2P19823 946 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 DSG3P32926 999 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 RANBP1P43487 201 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 POLGP54098 1239 aaPredicted RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 PPP2R5EQ16537 467 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 ANKRD22Q5VYY1 191 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 DCAF4Q8WV16 495 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 SERPINB12Q96P63 405 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 KCNG1Q9UIX4 513 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 CYB561D2O14569 222 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 NVLO15381 856 aaKnown RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 HAUS5O94927 633 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 FOSP01100 380 aaPredicted RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 TROVE2P10155 538 aaKnown RBP eCLIP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 SCG3Q8WXD2 468 aaKnown RBP15.44■□□□□ 0.06
HOXC11-202ENST00000546378 OLFML3Q9NRN5 406 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 KIAA1551Q9HCM1 1747 aa15.44■□□□□ 0.06
HOXC11-202ENST00000546378 NCANO14594 1321 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 ATP2A1O14983 1001 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms