RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 TAOK1Q7L7X3 1001 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 SPARTQ8N0X7 666 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 NOC3LQ8WTT2 800 aaKnown RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 DGCR14Q96DF8 476 aaKnown RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 DNAJC1Q96KC8 554 aaKnown RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 TMEM237Q96Q45 408 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 FNBP1Q96RU3 617 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 WDR18Q9BV38 432 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 WDR11Q9BZH6 1224 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 KIAA1683Q9H0B3 1180 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 MUC3BQ9H195 1237 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 HAUS4Q9H6D7 363 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 DCLRE1BQ9H816 532 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 TAB2Q9NYJ8 693 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 TMA7Q9Y2S6 64 aaKnown RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 ZNF646O15015 1829 aaPredicted RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 TMEM150BA6NC51 233 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 O00370 1275 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 IDH3BO43837 385 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 SNX2O60749 519 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 PRLRP16471 622 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 KRT4P19013 534 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 CYTH1Q15438 398 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 TGFBIQ15582 683 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 PPP1R18Q6NYC8 613 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 FAM160B2Q86V87 743 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 ZC3H18Q86VM9 953 aaKnown RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 CREG2Q8IUH2 290 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 DDHD1Q8NEL9 900 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 GSDMBQ8TAX9 411 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 HCAR2Q8TDS4 363 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 ANKRD49Q8WVL7 239 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 LARP4BQ92615 738 aaKnown RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 ASIC4Q96FT7 647 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 FBXL18Q96ME1 805 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 CTRCQ99895 268 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 STK33Q9BYT3 514 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 BLOC1S4Q9NUP1 217 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 MAP3K20Q9NYL2 800 aaKnown RBP7.05□□□□□ -1.28
NECAP1-208ENST00000545807 SAMD15Q9P1V8 674 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 PCDHGB3Q9Y5G1 929 aa7.05□□□□□ -1.28
NECAP1-208ENST00000545807 PASKQ96RG2 1323 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 A0A0B4J203 849 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 FUOMA2VDF0 154 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 PPP1R3GB7ZBB8 358 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SOCS7O14512 581 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 TEX33O43247 280 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SNX3O60493 162 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 GAS7O60861 476 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 FAM153BP0C7A2 387 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 RPS3AP61247 264 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 ERVK-24P63145 666 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 FAM153CQ494X1 144 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CDONQ4KMG0 1287 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SPOPLQ6IQ16 392 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 FIP1L1Q6UN15 594 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 RFPL4BQ6ZWI9 263 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SH3RF1Q7Z6J0 888 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 GPBP1Q86WP2 473 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CADM3Q8N126 398 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 AGGF1Q8N302 714 aaeCLIP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 EIF1ADQ8N9N8 165 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 FAM13CQ8NE31 585 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 ATXN2LQ8WWM7 1075 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CDCA5Q96FF9 252 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CAPZA3Q96KX2 299 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 TRIM47Q96LD4 638 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 RMDN3Q96TC7 470 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 ZNF577Q9BSK1 485 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 TRIM9Q9C026 710 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 LRMDAQ9H2I8 198 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 NDFIP2Q9NV92 336 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 FAM153AQ9UHL3 310 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 REXO2Q9Y3B8 237 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 BRCA1P38398 1863 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 KIF13BQ9NQT8 1826 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 FAM170AA1A519 330 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 LAD1O00515 517 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 VWA5AO00534 786 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 ENC1O14682 589 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 MYCP01106 439 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 ICAM1P05362 532 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 PABPC1P11940 636 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CTRB1P17538 263 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CETN2P41208 172 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 RBL2Q08999 1139 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CTRB2Q6GPI1 263 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 RNF207Q6ZRF8 634 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SLC51BQ86UW2 128 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CATSPER3Q86XQ3 398 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CNGA4Q8IV77 575 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 ST13P4Q8IZP2 240 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SLC17A8Q8NDX2 589 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SPATA4Q8NEY3 305 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 TOR1AIP2Q8NFQ8 470 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 CAGE1Q8TC20 777 aa7.04□□□□□ -1.28
NECAP1-208ENST00000545807 SCG3Q8WXD2 468 aaKnown RBP7.04□□□□□ -1.28
NECAP1-208ENST00000545807 TLCD1Q96CP7 247 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms