RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 BBOF1Q8ND07 529 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 TMEM191CA6NGB0 347 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 DPEP1P16444 411 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 RPA3P35244 121 aaPredicted RBP16.7■□□□□ 0.26
LDLR-204ENST00000545707 RTP1P59025 263 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 WDR72Q3MJ13 1102 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 ZBTB33Q86T24 672 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 TRABDQ9H4I3 376 aa16.7■□□□□ 0.26
LDLR-204ENST00000545707 ANP32DO95626 131 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 ASMTLO95671 621 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 MMP8P22894 467 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 HMGCS2P54868 508 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 IL9RQ01113 521 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
LDLR-204ENST00000545707 XKR3Q5GH77 459 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 DCUN1D2Q6PH85 259 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 CFAP57Q96MR6 1250 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 IP6K2Q9UHH9 426 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 CNTNAP2Q9UHC6 1331 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 LRRD1A4D1F6 860 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 SMTNL2Q2TAL5 461 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 PPP1R21Q6ZMI0 780 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 TRIM72Q6ZMU5 477 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 SPOCD1Q6ZMY3 1216 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 SAMD7Q7Z3H4 446 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 RCOR2Q8IZ40 523 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 ALLCQ8N6M5 410 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 VCPIP1Q96JH7 1222 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 ARHGEF3Q9NR81 526 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 STYXL1Q9Y6J8 313 aa16.69■□□□□ 0.26
LDLR-204ENST00000545707 WEE2P0C1S8 567 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 PDIA2Q13087 525 aaKnown RBP16.68■□□□□ 0.26
LDLR-204ENST00000545707 RIPK1Q13546 671 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 EFTUD2Q15029 972 aaKnown RBP eCLIP16.68■□□□□ 0.261e-6■■■■□ 19.3
LDLR-204ENST00000545707 SLC1A5Q15758 541 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 KCNT1Q5JUK3 1230 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 ASRGL1Q7L266 308 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 RELL1Q8IUW5 271 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 NSMCE1Q8WV22 266 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 CGRRF1Q99675 332 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 MYLK2Q9H1R3 596 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 C12orf65Q9H3J6 166 aaKnown RBP16.68■□□□□ 0.26
LDLR-204ENST00000545707 ETNK1Q9HBU6 452 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 TJP2Q9UDY2 1190 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 ZNF214Q9UL59 606 aaPredicted RBP16.68■□□□□ 0.26
LDLR-204ENST00000545707 PHTF1Q9UMS5 762 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 A0A0B4J269 797 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 SGK1O00141 431 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 MAFGO15525 162 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 DKC1O60832 514 aaKnown RBP eCLIP16.68■□□□□ 0.26
LDLR-204ENST00000545707 TJP3O95049 919 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 KCNA3P22001 575 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 CETN2P41208 172 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 MSH2P43246 934 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 MYL6P60660 151 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 EAPPQ56P03 285 aaPredicted RBP16.68■□□□□ 0.26
LDLR-204ENST00000545707 TLDC1Q6P9B6 456 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 TMEM130Q8N3G9 435 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 GBP7Q8N8V2 638 aaPredicted RBP16.68■□□□□ 0.26
LDLR-204ENST00000545707 REPS2Q8NFH8 660 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 TMEM237Q96Q45 408 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 PORCNQ9H237 461 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
LDLR-204ENST00000545707 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 FGFR1P11362 822 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 GBP2P32456 591 aaPredicted RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 BACE1P56817 501 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 MKRN3Q13064 507 aaKnown RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 DNAJC24Q6P3W2 148 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 WDTC1Q8N5D0 677 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 DENND1AQ8TEH3 1009 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 RBM41Q96IZ5 413 aaKnown RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 TACO1Q9BSH4 297 aaKnown RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 MTMR12Q9C0I1 747 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 ZWILCHQ9H900 591 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 ZNF302Q9NR11 478 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 PCNTO95613 3336 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 SPATA31C2B4DYI2 1134 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 CA4P22748 312 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 TARSP26639 723 aaKnown RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 GDF10P55107 478 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 RNF43Q68DV7 783 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 GPAT2Q6NUI2 795 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 XRRA1Q6P2D8 792 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 ERICH1Q86X53 443 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 TFAP2BQ92481 460 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 UTP4Q969X6 686 aaKnown RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 ERP27Q96DN0 273 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 ZNF668Q96K58 619 aaPredicted RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 MAK16Q9BXY0 300 aaKnown RBP16.67■□□□□ 0.26
LDLR-204ENST00000545707 CHKBQ9Y259 395 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms