RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ACO1P21399 889 aaKnown RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 TBXAS1P24557 533 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 EPHB2P29323 1055 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 DSG3P32926 999 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 GPS1Q13098 491 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 SLC1A5Q15758 541 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 CTC1Q2NKJ3 1217 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 TAF1BQ53T94 588 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 LVRNQ6Q4G3 990 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 CLNKQ7Z7G1 428 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 C4orf33Q8N1A6 199 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 CLEC4DQ8WXI8 215 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 KCNN1Q92952 543 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 PI4K2AQ9BTU6 479 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 DHRS4Q9BTZ2 278 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 FHDC1Q9C0D6 1143 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 SPATS2LQ9NUQ6 558 aaKnown RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 STOML1Q9UBI4 398 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 USP21Q9UK80 565 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 SMAPO00193 183 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 CCDC22O60826 627 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 DKC1O60832 514 aaKnown RBP eCLIP9.23□□□□□ -0.93
TDP1-204ENST00000545686 HLA-DRAP01903 254 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 KRT1P04264 644 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 GNA15P30679 374 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 PIK3CAP42336 1068 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 PTDSS1P48651 473 aaKnown RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 TAP1Q03518 808 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 CUL2Q13617 745 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 FASTKD3Q14CZ7 662 aaKnown RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 HIF1AQ16665 826 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 KLHL38Q2WGJ6 581 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 C11orf91Q3C1V1 193 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 DAB2IPQ5VWQ8 1189 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 PLA2G4FQ68DD2 849 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 ANO7Q6IWH7 933 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 ZNF449Q6P9G9 518 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 APBB1IPQ7Z5R6 666 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 ZBED8Q8IZ13 594 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 ATP11CQ8NB49 1132 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 RBBP8NLQ8NC74 664 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 MCPH1Q8NEM0 835 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 ZNF483Q8TF39 744 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 FAM118BQ9BPY3 351 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 KIFC3Q9BVG8 833 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 VPS11Q9H270 941 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 DENND2DQ9H6A0 471 aaPredicted RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 KIF9Q9HAQ2 790 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 DDX56Q9NY93 547 aaKnown RBP9.23□□□□□ -0.93
TDP1-204ENST00000545686 KCNG1Q9UIX4 513 aa9.23□□□□□ -0.93
TDP1-204ENST00000545686 TMEM150BA6NC51 233 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 TBC1D12O60347 775 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 DNAJC6O75061 913 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 NPTXRO95502 500 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 CBX6O95503 412 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 CALCAP01258 141 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 IL1BP01584 269 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 C4BPAP04003 597 aaKnown RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 LINGO3P0C6S8 592 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 PCK1P35558 622 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 CAP2P40123 477 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 TFDP3Q5H9I0 405 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 NAIF1Q69YI7 327 aaPredicted RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 LLGL2Q6P1M3 1020 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 ADGRD1Q6QNK2 874 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 SPOCD1Q6ZMY3 1216 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 C4orf50Q6ZRC1 276 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 NLGN1Q8N2Q7 840 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 GLIS1Q8NBF1 620 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 FAM151AQ8WW52 585 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 DNAJC9Q8WXX5 260 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 BSNDQ8WZ55 320 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 PRMT6Q96LA8 375 aaPredicted RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 FAM213AQ9BRX8 229 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 MAK16Q9BXY0 300 aaKnown RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 MMADHCQ9H3L0 296 aaPredicted RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 ACSS3Q9H6R3 686 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 USTQ9Y2C2 406 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 EFR3BQ9Y2G0 817 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 hCG_1818297A0A087WSY0 165 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 TMEM191CA6NGB0 347 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 E7ESA3 106 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 NFIBO00712 420 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 AHCYL1O43865 530 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 TGDSO95455 350 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 LSM8O95777 96 aaKnown RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 CALB1P05937 261 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 FESP07332 822 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 TMEM191BP0C7N4 346 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 KRT4P19013 534 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 VHLP40337 213 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 SSR1P43307 286 aaKnown RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 KLC1Q07866 573 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 PDIA2Q13087 525 aaKnown RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 TBC1D10BQ4KMP7 808 aaPredicted RBP9.22□□□□□ -0.93
TDP1-204ENST00000545686 FAM91A1Q658Y4 838 aa9.22□□□□□ -0.93
TDP1-204ENST00000545686 MFSD7Q6UXD7 560 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms