RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 POLR2BP30876 1174 aaKnown RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 VEPH1Q14D04 833 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 MGAT5BQ3V5L5 792 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 WSCD1Q658N2 575 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 ATL3Q6DD88 541 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 SHC4Q6S5L8 630 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 DNAJB7Q7Z6W7 309 aaPredicted RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 DCP1BQ8IZD4 617 aaKnown RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 GPD1LQ8N335 351 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 ZSCAN18Q8TBC5 510 aaPredicted RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 FAM200AQ8TCP9 573 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 C2orf15Q8WU43 125 aaKnown RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 DNASE1L2Q92874 299 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 NKD2Q969F2 451 aaPredicted RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 E2F7Q96AV8 911 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 ZSWIM3Q96MP5 696 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 NELL2Q99435 816 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 SEPT5Q99719 369 aaPredicted RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 DDX23Q9BUQ8 820 aaKnown RBP21.44■■□□□ 1.02
CHD4-213ENST00000545584 BCO2Q9BYV7 579 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 DNAJC25Q9H1X3 360 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 MAGEF1Q9HAY2 307 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 FAM13BQ9NYF5 915 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 AGAP1Q9UPQ3 857 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 TCHHQ07283 1943 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 A0A1W2PRU2 124 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 ITGB3P05106 788 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 PSMC3P17980 439 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 ME1P48163 572 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 GRM2Q14416 872 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 TAF12Q16514 161 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 TPRG1Q6ZUI0 275 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 FRMD5Q7Z6J6 570 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 ZSWIM2Q8NEG5 633 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 SHKBP1Q8TBC3 707 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 DEPDC1BQ8WUY9 529 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 IRF7Q92985 503 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 PSMG2Q969U7 264 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 BORCS6Q96GS4 357 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 OSBPL6Q9BZF3 934 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 DLGAP2Q9P1A6 1054 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 ITGA11Q9UKX5 1188 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 CFAP45Q9UL16 551 aa21.43■■□□□ 1.02
CHD4-213ENST00000545584 MRPS17Q9Y2R5 130 aaKnown RBP21.43■■□□□ 1.02
CHD4-213ENST00000545584 FAM170BA6NMN3 283 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 NCAM2O15394 837 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 KRT19P08727 400 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 TMEM191BP0C7N4 346 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 TSC2P49815 1807 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 TSPY1Q01534 308 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 SURF1Q15526 300 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 TMC8Q8IU68 726 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 C1orf210Q8IVY1 113 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 CSGALNACT2Q8N6G5 542 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 TTC9BQ8N6N2 239 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 LRRC52Q8N7C0 313 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 C1orf127Q8N9H9 656 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 SPPL2BQ8TCT7 592 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 LRRC3Q9BY71 257 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 ATXN3LQ9H3M9 355 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 TRPV4Q9HBA0 871 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 PDE11AQ9HCR9 933 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 LTB4R2Q9NPC1 389 aa21.42■■□□□ 1.02
CHD4-213ENST00000545584 ZNF233A6NK53 670 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 NRG2O14511 850 aaPredicted RBP21.41■■□□□ 1.02
CHD4-213ENST00000545584 EIF3DO15371 548 aaKnown RBP eCLIP21.41■■□□□ 1.028e-9■■□□□ 12.4
CHD4-213ENST00000545584 POLR2DO15514 142 aaKnown RBP21.41■■□□□ 1.02
CHD4-213ENST00000545584 HUS1O60921 280 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 SOAT2O75908 522 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 GDI1P31150 447 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 MAGEA9P43362 315 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 WNT7BP56706 349 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 RBP5P82980 135 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 BFSP1Q12934 665 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 ARHGAP15Q53QZ3 475 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 FAM26FQ5R3K3 315 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 CNNM4Q6P4Q7 775 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 VITQ6UXI7 678 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 ZNF852Q6ZMS4 543 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 YAF2Q8IY57 180 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 HPS3Q969F9 1004 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 ANKRD36BP1Q96IX9 119 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 C7orf25Q9BPX7 421 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 KIAA1586Q9HCI6 787 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 HEBP1Q9NRV9 189 aa21.41■■□□□ 1.02
CHD4-213ENST00000545584 MIA3Q5JRA6 1907 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 PRR23AA6NEV1 266 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 LRRN2O75325 713 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 CD72P21854 359 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 GABRR2P28476 465 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 VIPR2P41587 438 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 MYL7Q01449 175 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 MFSD6LQ8IWD5 586 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 TMEM86AQ8N2M4 240 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 SPRYD3Q8NCJ5 442 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 GLIS3Q8NEA6 775 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 GCNAQ96QF7 691 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 ABI2Q9NYB9 513 aaPredicted RBP21.4■■□□□ 1.02
CHD4-213ENST00000545584 PCDHA7Q9UN72 937 aa21.4■■□□□ 1.02
CHD4-213ENST00000545584 PCDHB5Q9Y5E4 795 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms