RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 GALTP07902 379 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 TRIM49P0CI25 452 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 TRIM49CP0CI26 452 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 MXI1P50539 228 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 DLG4P78352 724 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 KCNH2Q12809 1159 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 BIRC3Q13489 604 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 TRPC3Q13507 836 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
LTBR-214ENST00000545445 UPP1Q16831 310 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 VWA3BQ502W6 1294 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 C1orf220Q5T0J3 134 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 KIAA1841Q6NSI8 718 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 C15orf39Q6ZRI6 1047 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 KIAA2013Q8IYS2 634 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 LRRC52Q8N7C0 313 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 C1orf127Q8N9H9 656 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 DTWD2Q8NBA8 298 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 OR5B17Q8NGF7 314 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 C18orf25Q96B23 403 aaPredicted RBP12.74□□□□□ -0.37
LTBR-214ENST00000545445 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 HSD3B7Q9H2F3 369 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 TUBGCP4Q9UGJ1 667 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 R4GN57 208 aa12.74□□□□□ -0.37
LTBR-214ENST00000545445 PTPRJQ12913 1337 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 ARHGEF37A1IGU5 675 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 GTPBP10A4D1E9 387 aaKnown RBP12.73□□□□□ -0.37
LTBR-214ENST00000545445 CASTOR2A6NHX0 329 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 PODXLO00592 558 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 PIRO00625 290 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 NRP1O14786 923 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 TRAPPC3O43617 180 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 STAU1O95793 577 aaKnown RBP12.73□□□□□ -0.37
LTBR-214ENST00000545445 ITGB3P05106 788 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 ATICP31939 592 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 OR1G1P47890 313 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 GCLMP48507 274 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 FMO5P49326 533 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 BCAR1P56945 870 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 KRT17Q04695 432 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 SOX4Q06945 474 aaPredicted RBP12.73□□□□□ -0.37
LTBR-214ENST00000545445 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 ELAVL2Q12926 359 aaKnown RBP12.73□□□□□ -0.37
LTBR-214ENST00000545445 MYO1EQ12965 1108 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 KRT31Q15323 416 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 FILIP1LQ4L180 1135 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 HSP90AA4PQ58FG1 418 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
LTBR-214ENST00000545445 C9orf57Q5W0N0 161 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 LMBRD2Q68DH5 695 aaPredicted RBP12.73□□□□□ -0.37
LTBR-214ENST00000545445 SIX5Q8N196 739 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 MRPL43Q8N983 215 aaKnown RBP12.73□□□□□ -0.37
LTBR-214ENST00000545445 CCDC150Q8NCX0 1101 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 TAF4BQ92750 862 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 IMPG2Q9BZV3 1241 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 NDST4Q9H3R1 872 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 SPG21Q9NZD8 308 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 DNAJB4Q9UDY4 337 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 FBXL21Q9UKT6 434 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 COQ4Q9Y3A0 265 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 ZFHX4Q86UP3 3567 aa12.73□□□□□ -0.37
LTBR-214ENST00000545445 B3GAT3O94766 335 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 LMNAP02545 664 aaKnown RBP12.72□□□□□ -0.37
LTBR-214ENST00000545445 KRT19P08727 400 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 EPCAMP16422 314 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
LTBR-214ENST00000545445 SLC11A1P49279 550 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 CLCNKBP51801 687 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 MYL7Q01449 175 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 NCOA4Q13772 614 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 SGSM1Q2NKQ1 1148 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 SV2CQ496J9 727 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 TMC5Q6UXY8 1006 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 SLC39A11Q8N1S5 342 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 RNF214Q8ND24 703 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 CXorf38Q8TB03 319 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 AUTS2Q8WXX7 1259 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 VRTNQ9H8Y1 702 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 GOLGA2P5Q9HBQ8 144 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 DZANK1Q9NVP4 752 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 SIX4Q9UIU6 781 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 USTQ9Y2C2 406 aa12.72□□□□□ -0.37
LTBR-214ENST00000545445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.71□□□□□ -0.37
LTBR-214ENST00000545445 PES1O00541 588 aaKnown RBP12.71□□□□□ -0.37
LTBR-214ENST00000545445 B4GALT3O60512 393 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 TADA2AO75478 443 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 SERPINC1P01008 464 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 HLA-DRAP01903 254 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 ATP1A3P13637 1013 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 PIK3CAP42336 1068 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 TAF6P49848 677 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 GUCY2FP51841 1108 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
LTBR-214ENST00000545445 LILRA4P59901 499 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms