RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 MXRA7P84157 204 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 CYP2A13Q16696 494 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 TAPT1Q6NXT6 567 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 ZNF783Q6ZMS7 281 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 SPRED1Q7Z699 444 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 MICU3Q86XE3 530 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 CCAR1Q8IX12 1150 aaKnown RBP6.92□□□□□ -1.3
COPA-206ENST00000545266 SH3RF3Q8TEJ3 882 aaPredicted RBP6.92□□□□□ -1.3
COPA-206ENST00000545266 TRIM43Q96BQ3 446 aaPredicted RBP6.92□□□□□ -1.3
COPA-206ENST00000545266 ZC3H10Q96K80 434 aaKnown RBP6.92□□□□□ -1.3
COPA-206ENST00000545266 KIAA1586Q9HCI6 787 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 CHST12Q9NRB3 414 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 CPNE7Q9UBL6 633 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 CDYLQ9Y232 598 aa6.92□□□□□ -1.3
COPA-206ENST00000545266 ERN1O75460 977 aaKnown RBP6.91□□□□□ -1.3
COPA-206ENST00000545266 UNC5CO95185 931 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 KIF20AO95235 890 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 VIPR2P41587 438 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 KCNJ5P48544 419 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 SLC11A2P49281 568 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 ANXA11P50995 505 aaKnown RBP6.91□□□□□ -1.3
COPA-206ENST00000545266 UBE4AQ14139 1066 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 FNDC7Q5VTL7 733 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 SP5Q6BEB4 398 aaPredicted RBP6.91□□□□□ -1.3
COPA-206ENST00000545266 FOXR2Q6PJQ5 311 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 SESTD1Q86VW0 696 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 PLEKHG4BQ96PX9 1271 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 TRIB1Q96RU8 372 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 STRBPQ96SI9 672 aaKnown RBP6.91□□□□□ -1.3
COPA-206ENST00000545266 UNKQ9C0B0 810 aaKnown RBP6.91□□□□□ -1.3
COPA-206ENST00000545266 ZNF518BQ9C0D4 1074 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 RNF181Q9P0P0 153 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 HESX1Q9UBX0 185 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 SRRDQ9UH36 339 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 FAM50BQ9Y247 325 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 MYRFQ9Y2G1 1151 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 SPATA31A3Q5VYP0 1347 aa6.91□□□□□ -1.3
COPA-206ENST00000545266 PRAMEF33A0A0G2JMD5 474 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 PRAMEF10O60809 474 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 PQBP1O60828 265 aaKnown RBP6.9□□□□□ -1.3
COPA-206ENST00000545266 SOAT2O75908 522 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 GRPP07492 148 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 LAG3P18627 525 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 DDX6P26196 483 aaKnown RBP eCLIP6.9□□□□□ -1.3
COPA-206ENST00000545266 PIK3CBP42338 1070 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 CASP5P51878 434 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 WNT3P56703 355 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 SCAPQ12770 1279 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 CTBP1Q13363 440 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 LMBRD2Q68DH5 695 aaPredicted RBP6.9□□□□□ -1.3
COPA-206ENST00000545266 PPP4R4Q6NUP7 873 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 ARHGEF19Q8IW93 802 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 GPR20Q99678 358 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 SMOQ99835 787 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 HEPHQ9BQS7 1158 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 ZNF287Q9HBT7 754 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 GALNT9Q9HCQ5 603 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 COL20A1Q9P218 1284 aa6.9□□□□□ -1.3
COPA-206ENST00000545266 AFF4Q9UHB7 1163 aaKnown RBP6.9□□□□□ -1.3
COPA-206ENST00000545266 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.9□□□□□ -1.3
COPA-206ENST00000545266 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.9□□□□□ -1.3
COPA-206ENST00000545266 M0QYG6 137 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 POLRMTO00411 1230 aaKnown RBP6.89□□□□□ -1.31
COPA-206ENST00000545266 NDUFA10O95299 355 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 MAP4K4O95819 1239 aaPredicted RBP6.89□□□□□ -1.31
COPA-206ENST00000545266 CYP2C9P11712 490 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 ALDH5A1P51649 535 aaPredicted RBP6.89□□□□□ -1.31
COPA-206ENST00000545266 DGCR2P98153 550 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 RESTQ13127 1097 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 SLC13A2Q13183 592 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 PICALMQ13492 652 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 DYRK1AQ13627 763 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 TUBA3CQ13748 450 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 BOP1Q14137 746 aaKnown RBP6.89□□□□□ -1.31
COPA-206ENST00000545266 HLXQ14774 488 aaPredicted RBP6.89□□□□□ -1.31
COPA-206ENST00000545266 AMOTQ4VCS5 1084 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 TUBA3EQ6PEY2 450 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 CLNKQ7Z7G1 428 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 MRGPREQ86SM8 312 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 PSD4Q8NDX1 1056 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
COPA-206ENST00000545266 XPR1Q9UBH6 696 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 MAP3K2Q9Y2U5 619 aa6.89□□□□□ -1.31
COPA-206ENST00000545266 PLIN1O60240 522 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 TBC1D4O60343 1298 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 CDKL5O76039 1030 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 NBPF7P0C2Y1 421 aaPredicted RBP6.88□□□□□ -1.31
COPA-206ENST00000545266 BRAFP15056 766 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 PTGS2P35354 604 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 VAV2P52735 878 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 UCP3P55916 312 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 RPS7P62081 194 aaKnown RBP6.88□□□□□ -1.31
COPA-206ENST00000545266 HTRA4P83105 476 aaPredicted RBP6.88□□□□□ -1.31
COPA-206ENST00000545266 SPDYE7PQ495Y7 208 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 IL31Q6EBC2 164 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 GAS2L3Q86XJ1 694 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 DNAJC5GQ8N7S2 189 aa6.88□□□□□ -1.31
COPA-206ENST00000545266 NSUN7Q8NE18 718 aaKnown RBP6.88□□□□□ -1.31
COPA-206ENST00000545266 FAM46DQ8NEK8 389 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms