RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 MYO15AQ9UKN7 3530 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 TSC2P49815 1807 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 DOCK8Q8NF50 2099 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 MYO10Q9HD67 2058 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 FAM86C2PA6NEL3 165 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 MAPK13O15264 365 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 GADD45BO75293 160 aaPredicted RBP12.29□□□□□ -0.44
YBX3-216ENST00000544622 MICAL2O94851 1124 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 KIF20AO95235 890 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 STAU1O95793 577 aaKnown RBP12.29□□□□□ -0.44
YBX3-216ENST00000544622 NR3C1P04150 777 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 ASGR2P07307 311 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 RHOP08100 348 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 KRT19P08727 400 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 DLATP10515 647 aaKnown RBP12.29□□□□□ -0.44
YBX3-216ENST00000544622 CPB1P15086 417 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 PTPN2P17706 415 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 FSHRP23945 695 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 CASP4P49662 377 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 EPHA5P54756 1037 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 DUSP4Q13115 394 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 MTMR3Q13615 1198 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 SLC5A9Q2M3M2 681 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 PABPC1LQ4VXU2 614 aaKnown RBP12.29□□□□□ -0.44
YBX3-216ENST00000544622 UBALD2Q8IYN6 164 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 TMEM86AQ8N2M4 240 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 ATAD1Q8NBU5 361 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 ITFG1Q8TB96 612 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 FGF13Q92913 245 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 NXPE3Q969Y0 559 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 CCDC34Q96HJ3 373 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 PGLYRP2Q96PD5 576 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 FNBP1Q96RU3 617 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 PKMYT1Q99640 499 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 ACBD6Q9BR61 282 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 LRRC3Q9BY71 257 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 XYLT2Q9H1B5 865 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 DNAJC25Q9H1X3 360 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 CDH7Q9ULB5 785 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 PCDHA5Q9Y5H7 936 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 SNX9Q9Y5X1 595 aa12.29□□□□□ -0.44
YBX3-216ENST00000544622 LRRIQ3A6PVS8 624 aaPredicted RBP12.28□□□□□ -0.44
YBX3-216ENST00000544622 NRG2O14511 850 aaPredicted RBP12.28□□□□□ -0.44
YBX3-216ENST00000544622 PRRG1O14668 218 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 CALUO43852 315 aaPredicted RBP12.28□□□□□ -0.44
YBX3-216ENST00000544622 MOSPD3O75425 235 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 AKAP3O75969 853 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 TNNC2P02585 160 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 LRG1P02750 347 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 C4BPAP04003 597 aaKnown RBP12.28□□□□□ -0.44
YBX3-216ENST00000544622 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 TNNI1P19237 187 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
YBX3-216ENST00000544622 CCR2P41597 374 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 DLG4P78352 724 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 TWF1Q12792 350 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 SMARCB1Q12824 385 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 MYO1EQ12965 1108 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 SLC39A12Q504Y0 691 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 C1orf220Q5T0J3 134 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 HFE2Q6ZVN8 426 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 METTL23Q86XA0 190 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 THEM5Q8N1Q8 247 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 C2orf15Q8WU43 125 aaKnown RBP12.28□□□□□ -0.44
YBX3-216ENST00000544622 KBTBD7Q8WVZ9 684 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 CCDC47Q96A33 483 aaKnown RBP12.28□□□□□ -0.44
YBX3-216ENST00000544622 HPDLQ96IR7 371 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 SMOC2Q9H3U7 446 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 VRTNQ9H8Y1 702 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 POLIQ9UNA4 740 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 SLC27A5Q9Y2P5 690 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
YBX3-216ENST00000544622 IKBKBO14920 756 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 HUS1O60921 280 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 PRCPP42785 496 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 LHX1P48742 406 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 AP3M2P53677 418 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 ENPEPQ07075 957 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 TDGQ13569 410 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 HTR4Q13639 388 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 ZNF658Q5TYW1 1059 aaPredicted RBP12.27□□□□□ -0.45
YBX3-216ENST00000544622 FAM171BQ6P995 826 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 GET4Q7L5D6 327 aaPredicted RBP12.27□□□□□ -0.45
YBX3-216ENST00000544622 OSTM1Q86WC4 334 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 NPAS3Q8IXF0 933 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 SMYD4Q8IYR2 804 aaPredicted RBP12.27□□□□□ -0.45
YBX3-216ENST00000544622 SLC44A3Q8N4M1 653 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 SPPL2BQ8TCT7 592 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 RSAD2Q8WXG1 361 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.45
YBX3-216ENST00000544622 FGF14Q92915 247 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 ZNF512Q96ME7 567 aaPredicted RBP12.27□□□□□ -0.45
YBX3-216ENST00000544622 TMLHEQ9NVH6 421 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 RMND1Q9NWS8 449 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 DDX43Q9NXZ2 648 aaKnown RBP12.27□□□□□ -0.45
YBX3-216ENST00000544622 DUSP12Q9UNI6 340 aa12.27□□□□□ -0.45
YBX3-216ENST00000544622 TMEM221A6NGB7 291 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms