RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 RAPGEF1Q13905 1077 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 GLRA4Q5JXX5 417 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 SFMBT2Q5VUG0 894 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 C9orf57Q5W0N0 161 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 PHLDB3Q6NSJ2 640 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 PDXDC1Q6P996 788 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 CYP26C1Q6V0L0 522 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.19□□□□□ -0.781e-9■■■■■ 31
YBX3-215ENST00000544504 VPS36Q86VN1 386 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 LRRC8AQ8IWT6 810 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 TC2NQ8N9U0 490 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 BAP1Q92560 729 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 LPPQ93052 612 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 HPDLQ96IR7 371 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 ZMAT2Q96NC0 199 aaKnown RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 FAM193BQ96PV7 902 aaPredicted RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 ALG13Q9NP73 1137 aaKnown RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 ABHD10Q9NUJ1 306 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 SIX4Q9UIU6 781 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 PLAGL2Q9UPG8 496 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 FHOD1Q9Y613 1164 aa10.19□□□□□ -0.78
YBX3-215ENST00000544504 PDCD11Q14690 1871 aaKnown RBP10.19□□□□□ -0.78
YBX3-215ENST00000544504 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 PROB1E7EW31 1015 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 F8VZ95 297 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 PIRO00625 290 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 CST3P01034 146 aaPredicted RBP10.18□□□□□ -0.78
YBX3-215ENST00000544504 SOX5P35711 763 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 TAF6P49848 677 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 ADKP55263 362 aaKnown RBP10.18□□□□□ -0.78
YBX3-215ENST00000544504 JAM2P57087 298 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 ZXDAP98168 799 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 LRMPQ12912 555 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 DRAP1Q14919 205 aaPredicted RBP10.18□□□□□ -0.78
YBX3-215ENST00000544504 CLUL1Q15846 466 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 ASIC2Q16515 512 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 PTPN21Q16825 1174 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 WDR72Q3MJ13 1102 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 IQCEQ6IPM2 695 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 DPY19L2P1Q6NXN4 242 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 DPH6Q7L8W6 267 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 TMTC1Q8IUR5 882 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 GSTCDQ8NEC7 633 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 HELQQ8TDG4 1101 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 SHC3Q92529 594 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 YME1L1Q96TA2 773 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 BAG1Q99933 345 aaPredicted RBP10.18□□□□□ -0.78
YBX3-215ENST00000544504 XYLT2Q9H1B5 865 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 GDAP2Q9NXN4 497 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 AIPL1Q9NZN9 384 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 TUBGCP4Q9UGJ1 667 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 INPP5FQ9Y2H2 1132 aa10.18□□□□□ -0.78
YBX3-215ENST00000544504 TTC3P53804 2025 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 TECTAO75443 2155 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 DMXL1Q9Y485 3027 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.17□□□□□ -0.78
YBX3-215ENST00000544504 LRRC53A6NM62 1247 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 MEIS3P2A8K0S8 358 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 EPHB6O15197 1021 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 ARHGAP6O43182 974 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 HUS1O60921 280 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 GFPT2O94808 682 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 IPO7O95373 1038 aaKnown RBP10.17□□□□□ -0.78
YBX3-215ENST00000544504 SERPING1P05155 500 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 IBSPP21815 317 aaPredicted RBP10.17□□□□□ -0.78
YBX3-215ENST00000544504 FECHP22830 423 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 PRKCIP41743 596 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 NUBP1P53384 320 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 DLX2Q07687 328 aaPredicted RBP10.17□□□□□ -0.78
YBX3-215ENST00000544504 MEA1Q16626 185 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 ARHGAP44Q17R89 818 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 CLLU1OSQ5K130 101 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 DCLRE1AQ6PJP8 1040 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 ARHGEF19Q8IW93 802 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 FAM71AQ8IYT1 594 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 CCDC170Q8IYT3 715 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 LRRC43Q8N309 656 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 CXorf38Q8TB03 319 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 SPATA18Q8TC71 538 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 TATDN2Q93075 761 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 C18orf25Q96B23 403 aaPredicted RBP10.17□□□□□ -0.78
YBX3-215ENST00000544504 TMEM175Q9BSA9 504 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 PI4K2AQ9BTU6 479 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 BCO2Q9BYV7 579 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 LMAN2LQ9H0V9 348 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 LUC7LQ9NQ29 371 aaKnown RBP10.17□□□□□ -0.78
YBX3-215ENST00000544504 CD207Q9UJ71 328 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 NUB1Q9Y5A7 615 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 MICAL3Q7RTP6 2002 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 FRYLO94915 3013 aa10.17□□□□□ -0.78
YBX3-215ENST00000544504 COL4A6Q14031 1691 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 SSU72P8A0A1W2PR75 194 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 KPNA7A9QM74 516 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 LOC730098B7Z3J9 87 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 TMEM189-UBE2V1I3L0A0 370 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 PODXLO00592 558 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 TRAPPC3O43617 180 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 POMCP01189 267 aa10.16□□□□□ -0.78
YBX3-215ENST00000544504 FGFR1P11362 822 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms