RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ZSWIM8A7E2V4 1837 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 ASAP2O43150 1006 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 TJP3O95049 919 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 IL18RAPO95256 599 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 MARK3P27448 753 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 TRIP13Q15645 432 aaPredicted RBP18.75■□□□□ 0.59
SCARB1-208ENST00000544327 ZNF699Q32M78 642 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 ATF7IP2Q5U623 682 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 GPAT2Q6NUI2 795 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 EEPD1Q7L9B9 569 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 EXOC3L1Q86VI1 746 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 PACS2Q86VP3 889 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 LRRC71Q8N4P6 559 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 IPO4Q8TEX9 1081 aaKnown RBP18.75■□□□□ 0.59
SCARB1-208ENST00000544327 ANKRD36BP1Q96IX9 119 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 LHX5Q9H2C1 402 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 SMARCAD1Q9H4L7 1026 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 INTS9Q9NV88 658 aaKnown RBP18.75■□□□□ 0.59
SCARB1-208ENST00000544327 NINJ2Q9NZG7 142 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 LGALS13Q9UHV8 139 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 TNFSF13BQ9Y275 285 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 DRG1Q9Y295 367 aaKnown RBP18.75■□□□□ 0.59
SCARB1-208ENST00000544327 SBF1O95248 1867 aa18.75■□□□□ 0.59
SCARB1-208ENST00000544327 SPDYE5A6NIY4 337 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 HBP1O60381 514 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 ACSL3O95573 720 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 SSR1P43307 286 aaKnown RBP18.74■□□□□ 0.59
SCARB1-208ENST00000544327 SLCO1A2P46721 670 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 GSCP56915 257 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-208ENST00000544327 IFT88Q13099 833 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 CNGA2Q16280 664 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 IZUMO3Q5VZ72 239 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 CPLX4Q7Z7G2 160 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 TRIM50Q86XT4 487 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 SULF1Q8IWU6 871 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 TFAP2BQ92481 460 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
SCARB1-208ENST00000544327 FAM212AQ96EL1 285 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 R3HDMLQ9H3Y0 253 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 ELP3Q9H9T3 547 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 STRIP2Q9ULQ0 834 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 CEP83Q9Y592 693 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 ADM5C9JUS6 153 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 KRT1P04264 644 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 ABHD2P08910 425 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 TFAMQ00059 246 aaKnown RBP18.74■□□□□ 0.59
SCARB1-208ENST00000544327 OGDHQ02218 1023 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 POU5F1BQ06416 359 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-208ENST00000544327 MFSD7Q6UXD7 560 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 SPOCD1Q6ZMY3 1216 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 POLNQ7Z5Q5 900 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 ZCCHC9Q8N567 271 aaKnown RBP18.74■□□□□ 0.59
SCARB1-208ENST00000544327 SPATA33Q96N06 139 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 MCEEQ96PE7 176 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 BCO2Q9BYV7 579 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 ACTR5Q9H9F9 607 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-208ENST00000544327 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
SCARB1-208ENST00000544327 MBTD1Q05BQ5 628 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 FAM187BQ17R55 369 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 LONRF1Q17RB8 773 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 DCUN1D2Q6PH85 259 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 DLK2Q6UY11 383 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 ERICH1Q86X53 443 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 RHPN2Q8IUC4 686 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 DHX37Q8IY37 1157 aaKnown RBP18.73■□□□□ 0.59
SCARB1-208ENST00000544327 FNIP1Q8TF40 1166 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 OTUD5Q96G74 571 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 MMP19Q99542 508 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 TXNRD2Q9NNW7 524 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 EFR3BQ9Y2G0 817 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 IVNS1ABPQ9Y6Y0 642 aa18.73■□□□□ 0.59
SCARB1-208ENST00000544327 hCG_1818297A0A087WSY0 165 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 NDC80O14777 642 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 MED7O43513 233 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 PGK2P07205 417 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 TCF4P15884 667 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 GJC1P36383 396 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 ACTN3Q08043 901 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-208ENST00000544327 PPIL2Q13356 520 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 MOGSQ13724 837 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 KCTD2Q14681 263 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 ATP13A4Q4VNC1 1196 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 EEF1DP3Q658K8 133 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 CCDC121Q6ZUS5 278 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 PIGWQ7Z7B1 504 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 ANKRD13AQ8IZ07 590 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 ALLCQ8N6M5 410 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 NKD2Q969F2 451 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-208ENST00000544327 CABS1Q96KC9 395 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 CDT1Q9H211 546 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 SIGLEC16A6NMB1 481 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 F8VP50 259 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 DNALI1O14645 258 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-208ENST00000544327 WEE2P0C1S8 567 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 POLR2BP30876 1174 aaKnown RBP18.72■□□□□ 0.59
SCARB1-208ENST00000544327 PPARDQ03181 441 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 ITIH4Q14624 930 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 STAT4Q14765 748 aa18.72■□□□□ 0.59
SCARB1-208ENST00000544327 KYNUQ16719 465 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms