RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ZCWPW1Q9H0M4 648 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 GDPD2Q9HCC8 539 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 YIPF1Q9Y548 306 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 ZDBF2Q9HCK1 2354 aa25.04■■□□□ 1.6
CHFR-222ENST00000544093 MTMR11A4FU01 709 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 EXOC3O60645 756 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 TUFMP49411 452 aaKnown RBP25.03■■□□□ 1.6
CHFR-222ENST00000544093 CYP24A1Q07973 514 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 DUSP4Q13115 394 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 WSCD1Q658N2 575 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 PDZD4Q76G19 769 aaPredicted RBP25.03■■□□□ 1.6
CHFR-222ENST00000544093 SLC9A9Q8IVB4 645 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 NPAS3Q8IXF0 933 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 DCP1BQ8IZD4 617 aaKnown RBP25.03■■□□□ 1.6
CHFR-222ENST00000544093 SLC44A3Q8N4M1 653 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 TOP6BLQ8N6T0 577 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 OR10T2Q8NGX3 314 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 PRRX2Q99811 253 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 ASAH2Q9NR71 780 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 ASB3Q9Y575 518 aa25.03■■□□□ 1.6
CHFR-222ENST00000544093 PDXKO00764 312 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 RHOBTB3O94955 611 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 SRFP11831 508 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 TNNI1P19237 187 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 BFSP1Q12934 665 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 DPH6Q7L8W6 267 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 RDH13Q8NBN7 331 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 SIX4Q9UIU6 781 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 NUMBLQ9Y6R0 609 aa25.02■■□□□ 1.6
CHFR-222ENST00000544093 DLATP10515 647 aaKnown RBP25.01■■□□□ 1.59
CHFR-222ENST00000544093 EPHA5P54756 1037 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 MYL7Q01449 175 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 TSPY1Q01534 308 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 DPYDQ12882 1025 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 KCNB1Q14721 858 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 SLC39A12Q504Y0 691 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 PRSS36Q5K4E3 855 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 OR5B17Q8NGF7 314 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 SPPL2BQ8TCT7 592 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 HPDLQ96IR7 371 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 CGRRF1Q99675 332 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 RTP3Q9BQQ7 232 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 ACBD6Q9BR61 282 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 SMOC2Q9H3U7 446 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 GOLPH3LQ9H4A5 285 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 CEP72Q9P209 647 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 WNT16Q9UBV4 365 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 FBXL21Q9UKT6 434 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 SNX9Q9Y5X1 595 aa25.01■■□□□ 1.59
CHFR-222ENST00000544093 VNN2O95498 520 aa25■■□□□ 1.59
CHFR-222ENST00000544093 FGF19O95750 216 aa25■■□□□ 1.59
CHFR-222ENST00000544093 LHX1P48742 406 aa25■■□□□ 1.59
CHFR-222ENST00000544093 AP3M2P53677 418 aa25■■□□□ 1.59
CHFR-222ENST00000544093 NFE2Q16621 373 aaPredicted RBP25■■□□□ 1.59
CHFR-222ENST00000544093 SLC5A9Q2M3M2 681 aa25■■□□□ 1.59
CHFR-222ENST00000544093 ITIH5Q86UX2 942 aa25■■□□□ 1.59
CHFR-222ENST00000544093 PDCL2Q8N4E4 241 aa25■■□□□ 1.59
CHFR-222ENST00000544093 ATAD1Q8NBU5 361 aa25■■□□□ 1.59
CHFR-222ENST00000544093 RSAD2Q8WXG1 361 aa25■■□□□ 1.59
CHFR-222ENST00000544093 CCDC127Q96BQ5 260 aa25■■□□□ 1.59
CHFR-222ENST00000544093 KCTD10Q9H3F6 313 aa25■■□□□ 1.59
CHFR-222ENST00000544093 MFSD1Q9H3U5 465 aa25■■□□□ 1.59
CHFR-222ENST00000544093 PTPRJQ12913 1337 aa25■■□□□ 1.59
CHFR-222ENST00000544093 CALUO43852 315 aaPredicted RBP24.99■■□□□ 1.59
CHFR-222ENST00000544093 NUBP1P53384 320 aa24.99■■□□□ 1.59
CHFR-222ENST00000544093 LMBRD2Q68DH5 695 aaPredicted RBP24.99■■□□□ 1.59
CHFR-222ENST00000544093 TRAPPC11Q7Z392 1133 aa24.99■■□□□ 1.59
CHFR-222ENST00000544093 TMEM209Q96SK2 561 aa24.99■■□□□ 1.59
CHFR-222ENST00000544093 GPR88Q9GZN0 384 aa24.99■■□□□ 1.59
CHFR-222ENST00000544093 SLC2A4RGQ9NR83 387 aa24.99■■□□□ 1.59
CHFR-222ENST00000544093 RAPGEFL1Q9UHV5 662 aa24.99■■□□□ 1.59
CHFR-222ENST00000544093 L1RE1Q9UN81 338 aa24.99■■□□□ 1.59
CHFR-222ENST00000544093 PCSK1P29120 753 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 VEPH1Q14D04 833 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 PARM1Q6UWI2 310 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 ING5Q8WYH8 240 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 FGF14Q92915 247 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 PSMG2Q969U7 264 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 CRISPLD1Q9H336 500 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 DMAC2Q9NW81 257 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 DDX43Q9NXZ2 648 aaKnown RBP24.98■■□□□ 1.59
CHFR-222ENST00000544093 CIZ1Q9ULV3 898 aaPredicted RBP24.98■■□□□ 1.59
CHFR-222ENST00000544093 SLC27A5Q9Y2P5 690 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 MUC6Q6W4X9 2439 aa24.98■■□□□ 1.59
CHFR-222ENST00000544093 PRR29P0C7W0 189 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 CEBPBP17676 345 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 MGAT5BQ3V5L5 792 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 ADGRF2Q8IZF7 708 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 FMR1NBQ8N0W7 255 aaPredicted RBP24.97■■□□□ 1.59
CHFR-222ENST00000544093 SEPT5Q99719 369 aaPredicted RBP24.97■■□□□ 1.59
CHFR-222ENST00000544093 RMND1Q9NWS8 449 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 HOOK1Q9UJC3 728 aaKnown RBP24.97■■□□□ 1.59
CHFR-222ENST00000544093 TRAF3IP3Q9Y228 551 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 FRMD4BQ9Y2L6 1034 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 PCDHB5Q9Y5E4 795 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 KMT2EQ8IZD2 1858 aa24.97■■□□□ 1.59
CHFR-222ENST00000544093 NARSO43776 548 aaKnown RBP24.96■■□□□ 1.59
CHFR-222ENST00000544093 ECI2O75521 394 aa24.96■■□□□ 1.59
CHFR-222ENST00000544093 STAU1O95793 577 aaKnown RBP24.96■■□□□ 1.59
CHFR-222ENST00000544093 NR3C1P04150 777 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms