RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 MYL6P60660 151 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 TNNC1P63316 161 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 MYL7Q01449 175 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 TSPY1Q01534 308 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 TAF12Q16514 161 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 IQCEQ6IPM2 695 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 CREBRFQ8IUR6 639 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 SLC9A9Q8IVB4 645 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 ADGRF2Q8IZF7 708 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 PDCL2Q8N4E4 241 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 OR10T2Q8NGX3 314 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 PARD3BQ8TEW8 1205 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 ING5Q8WYH8 240 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 SNX25Q9H3E2 840 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
DDB1-222ENST00000543627 DNMT3BQ9UBC3 853 aaKnown RBP11.87□□□□□ -0.51
DDB1-222ENST00000543627 AFF4Q9UHB7 1163 aaKnown RBP11.87□□□□□ -0.51
DDB1-222ENST00000543627 L1RE1Q9UN81 338 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 TRAF3IP3Q9Y228 551 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 INSL5Q9Y5Q6 135 aa11.87□□□□□ -0.51
DDB1-222ENST00000543627 TRIM49BA6NDI0 452 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 DCXO43602 365 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 HCRTO43612 131 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 AKAP3O75969 853 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 C1RP00736 705 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 CYP11A1P05108 521 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 TRIM49P0CI25 452 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 TRIM49CP0CI26 452 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 EPB41P11171 864 aaKnown RBP11.86□□□□□ -0.51
DDB1-222ENST00000543627 GCLMP48507 274 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 EPHB3P54753 998 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 STX17P56962 302 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 GPR17Q13304 367 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 MYBPC2Q14324 1141 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 WDR72Q3MJ13 1102 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 PABPC1LQ4VXU2 614 aaKnown RBP11.86□□□□□ -0.51
DDB1-222ENST00000543627 TCERG1LQ5VWI1 586 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 SCARA5Q6ZMJ2 495 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 DCP1BQ8IZD4 617 aaKnown RBP11.86□□□□□ -0.51
DDB1-222ENST00000543627 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 OR6B3Q8NGW1 331 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 GIPC2Q8TF65 315 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 MCRS1Q96EZ8 462 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 MYADMQ96S97 322 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 PI4K2AQ9BTU6 479 aa11.86□□□□□ -0.51
DDB1-222ENST00000543627 OXCT2Q9BYC2 517 aaPredicted RBP11.86□□□□□ -0.51
DDB1-222ENST00000543627 MRPS23Q9Y3D9 190 aaKnown RBP11.86□□□□□ -0.51
DDB1-222ENST00000543627 MTCL1Q9Y4B5 1905 aaKnown RBP11.86□□□□□ -0.51
DDB1-222ENST00000543627 MTMR11A4FU01 709 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 PSMA7O14818 248 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 RHOP08100 348 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 GJA1P17302 382 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 PIK3CAP42336 1068 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 PMS1P54277 932 aaKnown RBP11.85□□□□□ -0.51
DDB1-222ENST00000543627 PSMC1P62191 440 aaKnown RBP11.85□□□□□ -0.51
DDB1-222ENST00000543627 NCOA4Q13772 614 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 ZNF699Q32M78 642 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 DCAF17Q5H9S7 520 aaPredicted RBP11.85□□□□□ -0.51
DDB1-222ENST00000543627 CYP4A22Q5TCH4 519 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 TDRD10Q5VZ19 366 aaKnown RBP11.85□□□□□ -0.51
DDB1-222ENST00000543627 CENPPQ6IPU0 288 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 LRRTM3Q86VH5 581 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 OSTM1Q86WC4 334 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 TTC9BQ8N6N2 239 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 CXorf38Q8TB03 319 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 ITFG1Q8TB96 612 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 GPR152Q8TDT2 470 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 RSAD2Q8WXG1 361 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
DDB1-222ENST00000543627 RTP3Q9BQQ7 232 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 ZCWPW1Q9H0M4 648 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 CRISPLD1Q9H336 500 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 GTF3C4Q9UKN8 822 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 CTNND2Q9UQB3 1225 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 YIPF1Q9Y548 306 aa11.85□□□□□ -0.51
DDB1-222ENST00000543627 PI4K2BG5E9Z4 385 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 GOLGA6L22H0YM25 854 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 ATP2C2O75185 946 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 C4BPAP04003 597 aaKnown RBP11.84□□□□□ -0.51
DDB1-222ENST00000543627 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
DDB1-222ENST00000543627 LMO2P25791 158 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 HOXA9P31269 272 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 GNL1P36915 607 aaPredicted RBP11.84□□□□□ -0.51
DDB1-222ENST00000543627 RAP1GAPP47736 663 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 LHX1P48742 406 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 AP3M2P53677 418 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 CDH8P55286 799 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 CCDC40Q4G0X9 1142 aa11.84□□□□□ -0.51
DDB1-222ENST00000543627 ZNF667Q5HYK9 610 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms