RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	FOXP1	Q9H334	677 aa	Predicted RBP	7.06	□□□□□ -1.28
CIT-213	ENST00000543324	NRDE2	Q9H7Z3	1164 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	PIDD1	Q9HB75	910 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	LRRC4C	Q9HCJ2	640 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	BRMS1	Q9HCU9	246 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	TUFT1	Q9NNX1	390 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	RBM12	Q9NTZ6	932 aa	Known RBP	7.06	□□□□□ -1.28
CIT-213	ENST00000543324	KIAA1522	Q9P206	1035 aa	Predicted RBP	7.06	□□□□□ -1.28
CIT-213	ENST00000543324	DNAJB4	Q9UDY4	337 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	APOBEC2	Q9Y235	224 aa	Known RBP	7.06	□□□□□ -1.28
CIT-213	ENST00000543324	PCDHB2	Q9Y5E7	798 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	PI4KA	P42356	2102 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	ABCA7	Q8IZY2	2146 aa		7.06	□□□□□ -1.28
CIT-213	ENST00000543324	GOLGA6L6	A8MZA4	724 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	NT5C1B-RDH14	C9J2C7	533 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	MED24	O75448	989 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	DDHD2	O94830	711 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	GALT	P07902	379 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CD59	P13987	128 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	RPA1	P27694	616 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	TRAPPC10	P48553	1259 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	SLC11A1	P49279	550 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	TOB1	P50616	345 aa	Predicted RBP	7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CBX1	P83916	185 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	NFATC3	Q12968	1075 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	FAM187B	Q17R55	369 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	XKR9	Q5GH70	373 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	WDR44	Q5JSH3	913 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	C6orf132	Q5T0Z8	1188 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	TWF2	Q6IBS0	349 aa	Known RBP	7.05	□□□□□ -1.28
CIT-213	ENST00000543324	GLB1L	Q6UWU2	654 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	OTUD6A	Q7L8S5	288 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CATSPER4	Q7RTX7	472 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CATSPER3	Q86XQ3	398 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	NOSTRIN	Q8IVI9	506 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CCDC83	Q8IWF9	413 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	ABI1	Q8IZP0	508 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	HDDC3	Q8N4P3	179 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	SCLT1	Q96NL6	688 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CAMK1G	Q96NX5	476 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	TMEM175	Q9BSA9	504 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	EIF2A	Q9BY44	585 aa	Known RBP	7.05	□□□□□ -1.28
CIT-213	ENST00000543324	PLA2G2F	Q9BZM2	168 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CCDC113	Q9H0I3	377 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	NT5C3A	Q9H0P0	336 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	MARCH5	Q9NX47	278 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	CGN	Q9P2M7	1197 aa	Known RBP	7.05	□□□□□ -1.28
CIT-213	ENST00000543324	DPP7	Q9UHL4	492 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	MBD1	Q9UIS9	605 aa	Predicted RBP	7.05	□□□□□ -1.28
CIT-213	ENST00000543324	IPP	Q9Y573	584 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	STK24	Q9Y6E0	443 aa		7.05	□□□□□ -1.28
CIT-213	ENST00000543324	NIPBL	Q6KC79	2804 aa	eCLIP	7.05	□□□□□ -1.28
CIT-213	ENST00000543324	THADA	Q6YHU6	1953 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	TNRC6B	Q9UPQ9	1833 aa	Known RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ADAMTS9	Q9P2N4	1935 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	HIVEP3	Q5T1R4	2406 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324		A0A1B0GUA9	196 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	CCDC66	A2RUB6	948 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	SMTNL1	A8MU46	457 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	DCLK1	O15075	740 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ATMIN	O43313	823 aa	Predicted RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	EXTL3	O43909	919 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ZC3H11A	O75152	810 aa	Known RBP eCLIP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ECI2	O75521	394 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ADCY5	O95622	1261 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	EDN1	P05305	212 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	OR52Z1	P0C646	297 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ARF4	P18085	180 aa	Predicted RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	MCM7	P33993	719 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	KARS	Q15046	597 aa	Known RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	NAB2	Q15742	525 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ECM1	Q16610	540 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	TRIM61	Q5EBN2	209 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	PMS2CL	Q68D20	193 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	NOTUM	Q6P988	496 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ELMSAN1	Q6PJG2	1045 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	CYP2U1	Q7Z449	544 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	GLRX5	Q86SX6	157 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	TPH2	Q8IWU9	490 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	COLGALT2	Q8IYK4	626 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	FAM26E	Q8N5C1	309 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	IGSF22	Q8N9C0	903 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	CNNM3	Q8NE01	707 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	SNIP1	Q8TAD8	396 aa	Known RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	PIGO	Q8TEQ8	1089 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	BSND	Q8WZ55	320 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	BAP1	Q92560	729 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	PGBD4	Q96DM1	585 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	TMX3	Q96JJ7	454 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	C8orf76	Q96K31	380 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	ZSCAN31	Q96LW9	406 aa	Predicted RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	CSRNP2	Q9H175	543 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	RSAD1	Q9HA92	442 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	BMP2K	Q9NSY1	1161 aa	Predicted RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	TMEM51	Q9NW97	253 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	FAM53C	Q9NYF3	392 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	STK39	Q9UEW8	545 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	PIAS3	Q9Y6X2	628 aa		7.04	□□□□□ -1.28
CIT-213	ENST00000543324	MORC2	Q9Y6X9	1032 aa	Predicted RBP	7.04	□□□□□ -1.28
CIT-213	ENST00000543324	NBAS	A2RRP1	2371 aa		7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms