RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 JMJD4Q9H9V9 463 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 TMBIM4Q9HC24 238 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 MAFGO15525 162 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 TXNP10599 105 aaKnown RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 STIP1P31948 543 aaKnown RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 EFL1Q7Z2Z2 1120 aaKnown RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 NR1H4Q96RI1 486 aaPredicted RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 TEX13BQ9BXU2 312 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 DLGAP2Q9P1A6 1054 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 CDV3Q9UKY7 258 aaKnown RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 DCAF4L1Q3SXM0 396 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 MFN1Q8IWA4 741 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 CCT7Q99832 543 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 FAM118BQ9BPY3 351 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 GOLPH3Q9H4A6 298 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 SMARCAD1Q9H4L7 1026 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 ANKEF1Q9NU02 776 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 MAGEA13PA6NCF6 341 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 NQO1P15559 274 aaKnown RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 COPAP53621 1224 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 BAATQ14032 418 aaPredicted RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 NFIXQ14938 502 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 WLSQ5T9L3 541 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 STRIP1Q5VSL9 837 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 KDELC2Q7Z4H8 507 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 GALNT4Q8N4A0 578 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 MAGEB18Q96M61 343 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 CRAMP1Q96RY5 1269 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 LBHD1Q9BQE6 289 aaPredicted RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 THAP2Q9H0W7 228 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 PHTF1Q9UMS5 762 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 TFR2Q9UP52 801 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 HPSEQ9Y251 543 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 KRT8P05787 483 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 NR3C2P08235 984 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 PLEKP08567 350 aaPredicted RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 CPB1P15086 417 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 SERPINB3P29508 390 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 THEMIS2Q5TEJ8 643 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 HHIPL2Q6UWX4 724 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 BTNL9Q6UXG8 535 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 SPATA2LQ8IUW3 424 aaPredicted RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 NDUFS3O75489 264 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 APOA4P06727 396 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 KPNB1Q14974 876 aaKnown RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 TEKT4Q8WW24 435 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 A0A087X0T9 212 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 MAGEB2O15479 319 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 EFCAB14O75071 495 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 FAM228BP0C875 321 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 RAP1GDS1P52306 607 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 C2orf69Q8N8R5 385 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 ACTRT1Q8TDG2 376 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 DCUN1D1Q96GG9 259 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 WHRNQ9P202 907 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 PIN4Q9Y237 131 aaKnown RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
TNC-212ENST00000542877 FAM32AQ9Y421 112 aaKnown RBP13.69□□□□□ -0.22
TNC-212ENST00000542877 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 TRIM49D1C9J1S8 452 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 O00370 1275 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 ZBTB22O15209 634 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 CD4P01730 458 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 UBTFL6P0CB48 400 aaPredicted RBP13.68□□□□□ -0.22
TNC-212ENST00000542877 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 RARGP13631 454 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 GTF2H1P32780 548 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
TNC-212ENST00000542877 ARID3BQ8IVW6 561 aaPredicted RBP13.68□□□□□ -0.22
TNC-212ENST00000542877 CSPG5O95196 566 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 GRIK1P39086 918 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 HMGCS2P54868 508 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 SHCBP1Q8NEM2 672 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 AGPAT3Q9NRZ7 376 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.68□□□□□ -0.22
TNC-212ENST00000542877 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 IFNEQ86WN2 208 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 SUGP1Q8IWZ8 645 aaKnown RBP13.68□□□□□ -0.22
TNC-212ENST00000542877 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 C17orf75Q9HAS0 396 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 PALMDQ9NP74 551 aa13.68□□□□□ -0.22
TNC-212ENST00000542877 SEPT3Q9UH03 358 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms