RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 DSEQ9UL01 958 aa12.85□□□□□ -0.35
PTPN6-219ENST00000542848 SMG5Q9UPR3 1016 aaKnown RBP12.85□□□□□ -0.35
PTPN6-219ENST00000542848 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
PTPN6-219ENST00000542848 SLC27A5Q9Y2P5 690 aa12.85□□□□□ -0.35
PTPN6-219ENST00000542848 EML5Q05BV3 1969 aa12.85□□□□□ -0.35
PTPN6-219ENST00000542848 NCANO14594 1321 aa12.85□□□□□ -0.35
PTPN6-219ENST00000542848 SPTBN2O15020 2390 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 PPEF2O14830 753 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 TBCAO75347 108 aaKnown RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 PLCG1P19174 1290 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 CCNE1P24864 410 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 NMT1P30419 496 aaKnown RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 DDIT3P35638 169 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 TMEM132DQ14C87 1099 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 KARSQ15046 597 aaKnown RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 RSPO4Q2I0M5 234 aaPredicted RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 ARHGAP15Q53QZ3 475 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 BRAPQ7Z569 592 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 CELF5Q8N6W0 485 aaKnown RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 RSPRY1Q96DX4 576 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 MKNK1Q9BUB5 465 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 ATXN3LQ9H3M9 355 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
PTPN6-219ENST00000542848 STYXL1Q9Y6J8 313 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
PTPN6-219ENST00000542848 MYO16Q9Y6X6 1858 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 PRR5-ARHGAP8B1AHC4 643 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 DPYSL4O14531 572 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
PTPN6-219ENST00000542848 NFICP08651 508 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 CXCL12P48061 93 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 ACOT2P49753 483 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 KPNA1P52294 538 aaPredicted RBP12.83□□□□□ -0.36
PTPN6-219ENST00000542848 ARHGAP8P85298 464 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 SMARCB1Q12824 385 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 LRRC32Q14392 662 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 ARHGAP29Q52LW3 1261 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 STXBP5Q5T5C0 1151 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 ADALQ6DHV7 355 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 THEM5Q8N1Q8 247 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 SPEM1Q8N4L4 309 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 RASSF8Q8NHQ8 419 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 C2orf15Q8WU43 125 aaKnown RBP12.83□□□□□ -0.36
PTPN6-219ENST00000542848 TMEM209Q96SK2 561 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 CCSER1Q9C0I3 900 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 ZCWPW1Q9H0M4 648 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 ZHX3Q9H4I2 956 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 DPP3Q9NY33 737 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
PTPN6-219ENST00000542848 RAB23Q9ULC3 237 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 NCOR2Q9Y618 2525 aa12.83□□□□□ -0.36
PTPN6-219ENST00000542848 MED19A0JLT2 244 aaPredicted RBP12.82□□□□□ -0.36
PTPN6-219ENST00000542848 MYBPHLA2RUH7 354 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 TGM1P22735 817 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 GABRR2P28476 465 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 TAF6P49848 677 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 LMNB2Q03252 620 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 GRIN1Q05586 938 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 VEPH1Q14D04 833 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 POSTNQ15063 836 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
PTPN6-219ENST00000542848 SLC39A12Q504Y0 691 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 ZC2HC1CQ53FD0 456 aaPredicted RBP12.82□□□□□ -0.36
PTPN6-219ENST00000542848 DGKKQ5KSL6 1271 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 GPR158Q5T848 1215 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 ZNF720Q7Z2F6 126 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 RALGPS2Q86X27 583 aaPredicted RBP12.82□□□□□ -0.36
PTPN6-219ENST00000542848 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 TTC9BQ8N6N2 239 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
PTPN6-219ENST00000542848 OR10T2Q8NGX3 314 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 LRRC3BQ96PB8 259 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 TASP1Q9H6P5 420 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 ZMYM5Q9UJ78 669 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 GMEB2Q9UKD1 530 aa12.82□□□□□ -0.36
PTPN6-219ENST00000542848 HELZP42694 1942 aaKnown RBP12.82□□□□□ -0.36
PTPN6-219ENST00000542848 SLC38A8A6NNN8 435 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 SPECC1L-ADORA2AF8WAN1 911 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 CYB561D2O14569 222 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 SOAT2O75908 522 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 IL18RAPO95256 599 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
PTPN6-219ENST00000542848 CDC25CP30307 473 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 CNR2P34972 360 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 SATB1Q01826 763 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 GAS6Q14393 721 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 MGAT5BQ3V5L5 792 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 LAIR1Q6GTX8 287 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 NT5DC4Q86YG4 428 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 SYNPOQ8N3V7 929 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 FAM200AQ8TCP9 573 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 SPPL2BQ8TCT7 592 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms