RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SPRED2Q7Z698 418 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 DRC7Q8IY82 874 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 FAM71AQ8IYT1 594 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 VPS52Q8N1B4 723 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 PDCL2Q8N4E4 241 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 MRPL43Q8N983 215 aaKnown RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 NEK11Q8NG66 645 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 POF1BQ8WVV4 589 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 PIK3R5Q8WYR1 880 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 SHC3Q92529 594 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 BAP1Q92560 729 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 TIFAQ96CG3 184 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 TMEM169Q96HH4 297 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 PKMYT1Q99640 499 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 RTP3Q9BQQ7 232 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 MRPL45Q9BRJ2 306 aaKnown RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 C11orf84Q9BUA3 381 aaPredicted RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 HERC2P3Q9BVR0 1158 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 GPR88Q9GZN0 384 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 NIF3L1Q9GZT8 377 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 ZBP1Q9H171 429 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 NKX2-4Q9H2Z4 354 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 CISHQ9NSE2 258 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 AIPL1Q9NZN9 384 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 FNIP2Q9P278 1114 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 BARX2Q9UMQ3 279 aaPredicted RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 POLIQ9UNA4 740 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 STXBP5LQ9Y2K9 1186 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 PRG3Q9Y2Y8 225 aaPredicted RBP6.28□□□□□ -1.4
ABCF1-207ENST00000542772 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.28□□□□□ -1.44e-14■■■■■ 66.7
ABCF1-207ENST00000542772 CHD7Q9P2D1 2997 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 LAMA3Q16787 3333 aa6.28□□□□□ -1.4
ABCF1-207ENST00000542772 SF3B1O75533 1304 aaKnown RBP eCLIP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 TRANK1O15050 2925 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 H7C4K7 107 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 I3L4J1 428 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 PES1O00541 588 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 GRM6O15303 877 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 ABLIM3O94929 683 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 ADCY5O95622 1261 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 CXCL14O95715 111 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 PAEPP09466 180 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 ODC1P11926 461 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 CLCN1P35523 988 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF132P52740 706 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 RAD23BP54727 409 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 POLR2FP61218 127 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 YWHAEP62258 255 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 TNNC1P63316 161 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 YWHAHQ04917 246 aaPredicted RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 SMARCB1Q12824 385 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 GPR17Q13304 367 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 GPM6BQ13491 265 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 RAB33AQ14088 237 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 TRIM14Q14142 442 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 DRAP1Q14919 205 aaPredicted RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 RTP2Q5QGT7 225 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 VARS2Q5ST30 1063 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 IQCEQ6IPM2 695 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 GJB7Q6PEY0 223 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 LILRA6Q6PI73 481 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 RSPO2Q6UXX9 243 aaPredicted RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 LRRTM3Q86VH5 581 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 OSTM1Q86WC4 334 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 METTL23Q86XA0 190 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 THEM5Q8N1Q8 247 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 PPM1KQ8N3J5 372 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 SLC4A11Q8NBS3 891 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 FBXO22Q8NEZ5 403 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 HASPINQ8TF76 798 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 SYN2Q92777 582 aaPredicted RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 KAT5Q92993 513 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 MMS19Q96T76 1030 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 CLSTN3Q9BQT9 956 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 LSM14BQ9BX40 385 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 NT5C1AQ9BXI3 368 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 ZCWPW1Q9H0M4 648 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 NUCKS1Q9H1E3 243 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF576Q9H609 170 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 ALG13Q9NP73 1137 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 NGRNQ9NPE2 291 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 DDX43Q9NXZ2 648 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 IMPACTQ9P2X3 320 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 HSFX1Q9UBD0 423 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 MTRRQ9UBK8 725 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 AJAP1Q9UKB5 411 aaPredicted RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 CDH9Q9ULB4 789 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 MAFFQ9ULX9 164 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 TIMM13Q9Y5L4 95 aaPredicted RBP6.27□□□□□ -1.41
ABCF1-207ENST00000542772 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
ABCF1-207ENST00000542772 OR6C75A6NL08 312 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 A8MXQ7 604 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TULP1O00294 542 aaPredicted RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 SOX1O00570 391 aaPredicted RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PAPLNO95428 1278 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms