RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 NOL4O94818 638 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 THP07101 528 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 APRTP07741 180 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 CCDC130P13994 396 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 SESN2P58004 480 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 PDE1BQ01064 536 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 PRKCZQ05513 592 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 PTPN11Q06124 597 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 MAPK7Q13164 816 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 FAM110CQ1W6H9 321 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 MTHFD1LQ6UB35 978 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 LNX1Q8TBB1 728 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 FEZF2Q8TBJ5 459 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 URGCPQ8TCY9 931 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 EPS8L1Q8TE68 723 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 GANQ9H2C0 597 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 ALG13Q9NP73 1137 aaKnown RBP10.7□□□□□ -0.7
TOP3A-208ENST00000542570 SAMD15Q9P1V8 674 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 CDY2AQ9Y6F7 541 aa10.7□□□□□ -0.7
TOP3A-208ENST00000542570 EXOC1LA0A1B0GW35 172 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 CCDC188H7C350 402 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 AP1G2O75843 785 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 PIAS1O75925 651 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 IL18RAPO95256 599 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 IVLP07476 585 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 RFX1P22670 979 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SULT1E1P49888 294 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 MTMR3Q13615 1198 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 BTBD8Q5XKL5 378 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 TMEM139Q8IV31 216 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 BRSK2Q8IWQ3 736 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 ZBED8Q8IZ13 594 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SAMD3Q8N6K7 520 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 CABS1Q96KC9 395 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 KREMEN1Q96MU8 473 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 DEFB118Q96PH6 123 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 ACO2Q99798 780 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 STMN4Q9H169 189 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 TSPAN16Q9UKR8 245 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 MAP1BP46821 2468 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 RASGRF2O14827 1237 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 CCT5P48643 541 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 AP3M2P53677 418 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 DUSP28Q4G0W2 176 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 MDH1BQ5I0G3 518 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 FBXO47Q5MNV8 452 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 APTXQ7Z2E3 356 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 PID1Q7Z2X4 250 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SRRM1Q8IYB3 904 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 HVCN1Q96D96 273 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 CAPS2Q9BXY5 557 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 ARHGAP39Q9C0H5 1083 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 WNT8AQ9H1J5 351 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 UBQLN1Q9UMX0 589 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 DFFAO00273 331 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SLC26A4O43511 780 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 KCNJ6P48051 423 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 EIF3EP60228 445 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 RPL7AP62424 266 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 IRF2BP2Q7Z5L9 587 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 USP38Q8NB14 1042 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SH3TC2Q8TF17 1288 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 KLF6Q99612 283 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 LPIN3Q9BQK8 851 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 TRPC7Q9HCX4 862 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 MYO5AQ9Y4I1 1855 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 P4HA2O15460 535 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 KCNN4O15554 427 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 GLI1P08151 1106 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 IRF1P10914 325 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 HOXD13P35453 343 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 PTENP60484 403 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 CLUL1Q15846 466 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 PPP2R5EQ16537 467 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 KYNUQ16719 465 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SDHAF4Q5VUM1 108 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 IZUMO3Q5VZ72 239 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SLC27A1Q6PCB7 646 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 CPNE8Q86YQ8 564 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 SLC2A14Q8TDB8 520 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 NDRG1Q92597 394 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 RBM41Q96IZ5 413 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 EIF2AQ9BY44 585 aaKnown RBP10.69□□□□□ -0.7
TOP3A-208ENST00000542570 KIF9Q9HAQ2 790 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
TOP3A-208ENST00000542570 MYPNQ86TC9 1320 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 EDIL3O43854 480 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ATP9BO43861 1147 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 GAS2O43903 313 aaKnown RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ENDOD1O94919 500 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 CPP00450 1065 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 RBP3P10745 1247 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 PYGMP11217 842 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 PBX1P40424 430 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 PDIA2Q13087 525 aaKnown RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 PSMD6Q15008 389 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms