RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 GBP2P32456 591 aaPredicted RBP16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 CASP4P49662 377 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 BFSP1Q12934 665 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 DUSP4Q13115 394 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 PABPC1LQ4VXU2 614 aaKnown RBP16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 ZCWPW2Q504Y3 356 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 TRIM67Q6ZTA4 783 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 THEM5Q8N1Q8 247 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 TMEM86AQ8N2M4 240 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 TOP6BLQ8N6T0 577 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 ITFG1Q8TB96 612 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 SPATA18Q8TC71 538 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 HPDLQ96IR7 371 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 PGLYRP2Q96PD5 576 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 GSDMAQ96QA5 445 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 KCNK12Q9HB15 430 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 POLIQ9UNA4 740 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
ECHDC2-223ENST00000542552 ANHXE9PGG2 379 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 HUS1O60921 280 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 RHOP08100 348 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 PTPN2P17706 415 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 ANP32AP39687 249 aaKnown RBP16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 MYO1EQ12965 1108 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 SOWAHAQ2M3V2 549 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 GET4Q7L5D6 327 aaPredicted RBP16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 DPH6Q7L8W6 267 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 LRRTM3Q86VH5 581 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 UBALD2Q8IYN6 164 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 ATAD1Q8NBU5 361 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 RMND1Q9NWS8 449 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 CEP72Q9P209 647 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 IGSF9Q9P2J2 1179 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 CDH7Q9ULB5 785 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 YIPF1Q9Y548 306 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 PCDHA5Q9Y5H7 936 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 SNX9Q9Y5X1 595 aa16.61■□□□□ 0.25
ECHDC2-223ENST00000542552 WDFY4Q6ZS81 3184 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 GABRDO14764 452 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 MAPK13O15264 365 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 SMC2O95347 1197 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 STAU1O95793 577 aaKnown RBP16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 AP3M2P53677 418 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 EPHA5P54756 1037 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 MCCD1P59942 119 aaPredicted RBP16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 SIGLEC14Q08ET2 396 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 TWF1Q12792 350 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 SMARCB1Q12824 385 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 MTMR3Q13615 1198 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 SLC5A9Q2M3M2 681 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 SLC39A12Q504Y0 691 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 PRSS36Q5K4E3 855 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 ZNF658Q5TYW1 1059 aaPredicted RBP16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 SMYD4Q8IYR2 804 aaPredicted RBP16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 TMC2Q8TDI7 906 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 FGF13Q92913 245 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 NXPE3Q969Y0 559 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 ASIC4Q96FT7 647 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 XYLT2Q9H1B5 865 aa16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 HOOK1Q9UJC3 728 aaKnown RBP16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
ECHDC2-223ENST00000542552 MICAL2O94851 1124 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 C4BPAP04003 597 aaKnown RBP16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 NR2F2P24468 414 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 TDGQ13569 410 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 HTR4Q13639 388 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 C1orf220Q5T0J3 134 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 BMP8AQ7Z5Y6 402 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 OSTM1Q86WC4 334 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 NPAS3Q8IXF0 933 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 TTC9BQ8N6N2 239 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 C2orf15Q8WU43 125 aaKnown RBP16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 KBTBD7Q8WVZ9 684 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 ERCC4Q92889 916 aaPredicted RBP16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 ZNF512Q96ME7 567 aaPredicted RBP16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 PKMYT1Q99640 499 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 CORO1BQ9BR76 489 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 LRRC3Q9BY71 257 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 DNAJC25Q9H1X3 360 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 SMOC2Q9H3U7 446 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 FRMD4BQ9Y2L6 1034 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 SLC27A5Q9Y2P5 690 aa16.59■□□□□ 0.25
ECHDC2-223ENST00000542552 TMEM221A6NGB7 291 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 M0R296 226 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 IKBKBO14920 756 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 AKAP3O75969 853 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 FAM163BP0C2L3 166 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 CCR2P41597 374 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 PRCPP42785 496 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 LHX1P48742 406 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 DLG4P78352 724 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 ENPEPQ07075 957 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 PLD1Q13393 1074 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 TDRD10Q5VZ19 366 aaKnown RBP16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 POTEHQ6S545 545 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms