RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 EMP3P54852 163 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 TBX4P57082 545 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 ATP11AP98196 1134 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 SPAG1Q07617 926 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 HSPA14Q0VDF9 509 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 CYLC2Q14093 348 aaPredicted RBP11.71□□□□□ -0.54
CDH3-203ENST00000542274 INSCQ1MX18 579 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 MIIPQ5JXC2 388 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 CTRB2Q6GPI1 263 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.54
CDH3-203ENST00000542274 NELFCDQ8IXH7 590 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 CADM3Q8N126 398 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 DTX3Q8N9I9 347 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 USP38Q8NB14 1042 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 IPCEF1Q8WWN9 437 aaPredicted RBP11.71□□□□□ -0.54
CDH3-203ENST00000542274 LENG9Q96B70 501 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 DNAJC19Q96DA6 116 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 EHMT1Q9H9B1 1298 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 SCPEP1Q9HB40 452 aa11.71□□□□□ -0.54
CDH3-203ENST00000542274 EPHB6O15197 1021 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 ZMYND10O75800 440 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 CFBP00751 764 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 FYNP06241 537 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 KRT4P19013 534 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 ALAS2P22557 587 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 MTIF2P46199 727 aaKnown RBP11.7□□□□□ -0.54
CDH3-203ENST00000542274 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 NCAPH2Q6IBW4 605 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 PDXDC1Q6P996 788 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 UNC13DQ70J99 1090 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 ANO5Q75V66 913 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 EXD1Q8NHP7 514 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 DNAJC9Q8WXX5 260 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 THAP9Q9H5L6 903 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 ZC3H7BQ9UGR2 993 aaKnown RBP11.7□□□□□ -0.54
CDH3-203ENST00000542274 RBMX2Q9Y388 322 aaKnown RBP11.7□□□□□ -0.54
CDH3-203ENST00000542274 TRIM64A6NGJ6 449 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 TRIM64BA6NI03 449 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 CCT8L1PA6NM43 557 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 ALAS1P13196 640 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 NR1D1P20393 614 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 RAD23BP54727 409 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 PRKCEQ02156 737 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 CNNM4Q6P4Q7 775 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 KLHL35Q6PF15 583 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 CAND1Q86VP6 1230 aaKnown RBP11.7□□□□□ -0.54
CDH3-203ENST00000542274 CNGA4Q8IV77 575 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 RHOT2Q8IXI1 618 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 THAP1Q9NVV9 213 aa11.7□□□□□ -0.54
CDH3-203ENST00000542274 CARNS1A5YM72 827 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 H3BUI4 141 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 KPNA6O60684 536 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 ASNSP08243 561 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 VAV1P15498 845 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 HMOX2P30519 316 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 HOXD13P35453 343 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 SPIRE1Q08AE8 756 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 COASYQ13057 564 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 WDR59Q6PJI9 974 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 CORO6Q6QEF8 472 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 DSTYKQ6XUX3 929 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 DDHD1Q8NEL9 900 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 ETNPPLQ8TBG4 499 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 SLC7A3Q8WY07 619 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 NOC4LQ9BVI4 516 aaKnown RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 RAB34Q9BZG1 259 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 MAGEF1Q9HAY2 307 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 FANCEQ9HB96 536 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 C8orf4Q9NR00 106 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 STK17AQ9UEE5 414 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 DNAJC16Q9Y2G8 782 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 REXO2Q9Y3B8 237 aaKnown RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 SOCS7O14512 581 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 ZBTB39O15060 712 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 HDAC3O15379 428 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 CRYZL1O95825 349 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 LMNAP02545 664 aaKnown RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 NAGAP17050 411 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 EEF1GP26641 437 aaKnown RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 STAT2P52630 851 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 SNX16P57768 344 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 LACTBP83111 547 aaPredicted RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 MAP3K10Q02779 954 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 CETN1Q12798 172 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 ORC2Q13416 577 aaPredicted RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 SIM2Q14190 667 aaPredicted RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 ZC2HC1CQ53FD0 456 aaPredicted RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 CENPPQ6IPU0 288 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 CATSPER3Q86XQ3 398 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 CDC26Q8NHZ8 85 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 ITPKCQ96DU7 683 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 PCMTD1Q96MG8 357 aaPredicted RBP11.69□□□□□ -0.54
CDH3-203ENST00000542274 TTC1Q99614 292 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 HPS4Q9NQG7 708 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 SELENONQ9NZV5 590 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
CDH3-203ENST00000542274 HBS1LQ9Y450 684 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms