RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CCDC189A1A4V9 331 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 LRRD1A4D1F6 860 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 P4HA2O15460 535 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 ALADP13716 330 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 ADRA1DP25100 572 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 NLRP11P59045 1033 aaKnown RBP16.17■□□□□ 0.18
CNOT9-208ENST00000542068 SMTNL2Q2TAL5 461 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 ZNF568Q3ZCX4 644 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 TXNRD3NBQ6F5E7 133 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 MFSD7Q6UXD7 560 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 TRABD2AQ86V40 505 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 ZBTB10Q96DT7 871 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 CFAP57Q96MR6 1250 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 USH1CQ9Y6N9 552 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 KRT19P08727 400 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 FGFR1P11362 822 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 CPA2P48052 419 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 NRLP54845 237 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 WNT7BP56706 349 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 ACTR2P61160 394 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 GTF2BQ00403 316 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 RNF43Q68DV7 783 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 FAM83AQ86UY5 434 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 RHOT1Q8IXI2 618 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 GPD1LQ8N335 351 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 NSUN6Q8TEA1 469 aaKnown RBP16.17■□□□□ 0.18
CNOT9-208ENST00000542068 LPAR1Q92633 364 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 SLC9A2Q9UBY0 812 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 ZFP69BQ9UJL9 534 aa16.17■□□□□ 0.18
CNOT9-208ENST00000542068 DALRD3Q5D0E6 543 aaKnown RBP16.16■□□□□ 0.18
CNOT9-208ENST00000542068 NCAPG2Q86XI2 1143 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 C4orf19Q8IY42 314 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 MAB21L3Q8N8X9 362 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.16■□□□□ 0.18
CNOT9-208ENST00000542068 MAML1Q92585 1016 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 MAK16Q9BXY0 300 aaKnown RBP16.16■□□□□ 0.18
CNOT9-208ENST00000542068 CSDE1O75534 798 aaKnown RBP16.16■□□□□ 0.18
CNOT9-208ENST00000542068 PROSCO94903 275 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 ASMTLO95671 621 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 PSAPP07602 524 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 FSTL1Q12841 308 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 MUM1Q2TAK8 710 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 MDH1BQ5I0G3 518 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 LIN9Q5TKA1 542 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 MAIP1Q8WWC4 291 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 MSTO1Q9BUK6 570 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 F8VP50 259 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 HLA-DRAP01903 254 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 CD19P15391 556 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 CYP24A1Q07973 514 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 NFX1Q12986 1120 aaKnown RBP16.16■□□□□ 0.18
CNOT9-208ENST00000542068 ORC1Q13415 861 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 THEMIS2Q5TEJ8 643 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 SLC39A4Q6P5W5 647 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 DCUN1D2Q6PH85 259 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 OTOAQ7RTW8 1153 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 CCDC125Q86Z20 511 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 AGBL3Q8NEM8 1001 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 AGO2Q9UKV8 859 aaKnown RBP16.16■□□□□ 0.18
CNOT9-208ENST00000542068 IVNS1ABPQ9Y6Y0 642 aa16.16■□□□□ 0.18
CNOT9-208ENST00000542068 UMODL1Q5DID0 1318 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 PEX11AO75192 247 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 GNA15P30679 374 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 MKRN3Q13064 507 aaKnown RBP16.15■□□□□ 0.18
CNOT9-208ENST00000542068 TFDP1Q14186 410 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 KCNT1Q5JUK3 1230 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 NLRP9Q7RTR0 991 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 THNSL1Q8IYQ7 743 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 RFWD2Q8NHY2 731 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 SLC7A3Q8WY07 619 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 ZNF516Q92618 1163 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 DENND2DQ9H6A0 471 aaPredicted RBP16.15■□□□□ 0.18
CNOT9-208ENST00000542068 ZWILCHQ9H900 591 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 RNPEPL1Q9HAU8 725 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 RBAKQ9NYW8 714 aaPredicted RBP16.15■□□□□ 0.18
CNOT9-208ENST00000542068 NXF1Q9UBU9 619 aaKnown RBP16.15■□□□□ 0.18
CNOT9-208ENST00000542068 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 MYPNQ86TC9 1320 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 UNGP13051 313 aaPredicted RBP16.15■□□□□ 0.18
CNOT9-208ENST00000542068 GCAP28676 217 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 MAN1A1P33908 653 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 GPC3P51654 580 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 ALCAMQ13740 583 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 CCNG2Q16589 344 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 BBS9Q3SYG4 887 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 SCYL3Q8IZE3 742 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 ZNF280CQ8ND82 737 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 ZNF526Q8TF50 670 aaPredicted RBP16.15■□□□□ 0.18
CNOT9-208ENST00000542068 PRR11Q96HE9 360 aaPredicted RBP16.15■□□□□ 0.18
CNOT9-208ENST00000542068 CYP26B1Q9NR63 512 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 CENPFP49454 3210 aa16.15■□□□□ 0.18
CNOT9-208ENST00000542068 SFNP31947 248 aa16.14■□□□□ 0.18
CNOT9-208ENST00000542068 TUBP50607 506 aa16.14■□□□□ 0.18
CNOT9-208ENST00000542068 IGBP1P78318 339 aa16.14■□□□□ 0.18
CNOT9-208ENST00000542068 TFAMQ00059 246 aaKnown RBP16.14■□□□□ 0.18
CNOT9-208ENST00000542068 CAV1Q03135 178 aa16.14■□□□□ 0.18
CNOT9-208ENST00000542068 TTLL12Q14166 644 aaPredicted RBP16.14■□□□□ 0.18
CNOT9-208ENST00000542068 MAPK6Q16659 721 aa16.14■□□□□ 0.18
CNOT9-208ENST00000542068 LRRC71Q8N4P6 559 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms