RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ZACNQ401N2 412 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 UBXN11Q5T124 520 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 SLC27A1Q6PCB7 646 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 CYP26C1Q6V0L0 522 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 C15orf39Q6ZRI6 1047 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 TRAPPC11Q7Z392 1133 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 ZNF571Q7Z3V5 609 aaPredicted RBP8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 SRGAP1Q7Z6B7 1085 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 REXO1L1PQ8IX06 675 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 PACSIN1Q9BY11 444 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 PAK6Q9NQU5 681 aaPredicted RBP8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 SEPT11Q9NVA2 429 aaKnown RBP8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 CHD7Q9P2D1 2997 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 PARP2Q9UGN5 583 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 CHORDC1Q9UHD1 332 aaPredicted RBP8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 ADAMTS1Q9UHI8 967 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 TRPV2Q9Y5S1 764 aa8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 TDRD15B5MCY1 1934 aaKnown RBP8.3□□□□□ -1.08
AC005840.3-201ENST00000541888 A0A087X0T9 212 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 MAPK13O15264 365 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 CYP26A1O43174 497 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 KPNA6O60684 536 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 SGPL1O95470 568 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 WEE2P0C1S8 567 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TMEM191BP0C7N4 346 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 FAM228BP0C875 321 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 CKBP12277 381 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 KRT5P13647 590 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 KIF11P52732 1056 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 GDF10P55107 478 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 CDH8P55286 799 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 NKX3-2P78367 333 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 PPP2R3AQ06190 1150 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 MGAT3Q09327 533 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 KLHL30Q0D2K2 578 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 NCOA4Q13772 614 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 LPIN1Q14693 890 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 C2CD6Q53TS8 623 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 FIGNQ5HY92 759 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TMEM214Q6NUQ4 689 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 NOTUMQ6P988 496 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 IRF2BP2Q7Z5L9 587 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 SLC47A2Q86VL8 602 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 C1orf127Q8N9H9 656 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 SMG8Q8ND04 991 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TMEM174Q8WUU8 243 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 SCLYQ96I15 445 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 ADPGKQ9BRR6 497 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 PPP1R12CQ9BZL4 782 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 LACRTQ9GZZ8 138 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 DEF6Q9H4E7 631 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 SIX4Q9UIU6 781 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 KCNG1Q9UIX4 513 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 PADI3Q9ULW8 664 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 IPPQ9Y573 584 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 EPN1Q9Y6I3 576 aaPredicted RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 GTPBP10A4D1E9 387 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 HCRTO43612 131 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TFRCP02786 760 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 F11P03951 625 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 MCF2P10911 925 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TNNT1P13805 278 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 POLR2BP30876 1174 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 CCL23P55773 120 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 NOP14P78316 857 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 CLDN10P78369 228 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 POU5F1BQ06416 359 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 SOX4Q06945 474 aaPredicted RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TCTN1Q2MV58 587 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TRIM71Q2Q1W2 868 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TAF2Q6P1X5 1199 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 OLIG1Q8TAK6 271 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 CCDC42Q96M95 316 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 ACAP3Q96P50 834 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 KIAA1586Q9HCI6 787 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 ZNHIT6Q9NWK9 470 aaKnown RBP8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 TAS2R14Q9NYV8 317 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 HMGXB4Q9UGU5 601 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
AC005840.3-201ENST00000541888 MROH7Q68CQ1 1323 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 C5orf42Q9H799 3197 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 MACROD2A1Z1Q3 448 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 F8W810 466 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 AKR1B10O60218 316 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 CLTAP09496 248 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 ABCD1P33897 745 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 SOX5P35711 763 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 MLH1P40692 756 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 GAS6Q14393 721 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 TMEM132DQ14C87 1099 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 ARHGEF6Q15052 776 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 TLR1Q15399 786 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 PAN2Q504Q3 1202 aaKnown RBP8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 C4orf17Q53FE4 359 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 FBXO47Q5MNV8 452 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 SYT10Q6XYQ8 523 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms