RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ASTE1Q2TB18 679 aaPredicted RBP15.23■□□□□ 0.03
GCFC2-211ENST00000541687 SPDYE2Q495Y8 402 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 C2orf40Q9H1Z8 148 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 RANBP17Q9H2T7 1088 aaKnown RBP15.23■□□□□ 0.03
GCFC2-211ENST00000541687 PSMC3IPQ9P2W1 217 aaPredicted RBP15.23■□□□□ 0.03
GCFC2-211ENST00000541687 MAFGO15525 162 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 CPA2P48052 419 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 BACE1P56817 501 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 CENPCQ03188 943 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 KDSRQ06136 332 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 KIF22Q14807 665 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 RPS6KA2Q15349 733 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 ATF7IP2Q5U623 682 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 NUDCD3Q8IVD9 361 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 EXOC8Q8IYI6 725 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 TMC2Q8TDI7 906 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 FAM161BQ96MY7 647 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 PCDHB18PQ96TA0 734 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 COG5Q9UP83 839 aa15.23■□□□□ 0.03
GCFC2-211ENST00000541687 CFLARO15519 480 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 MCUQ8NE86 351 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 SNED1Q8TER0 1413 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 FOXO6A8MYZ6 492 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 ITGB3P05106 788 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 POLE2P56282 527 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 SNRPFP62306 86 aaKnown RBP15.22■□□□□ 0.03
GCFC2-211ENST00000541687 NME3Q13232 169 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 MYBPC2Q14324 1141 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 ANKRD20A8PQ5CZ79 823 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 ZNF677Q86XU0 584 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 MREGQ8N565 214 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 AGBL3Q8NEM8 1001 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 ZNF606Q8WXB4 792 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 AGAP3Q96P47 875 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 TTC1Q99614 292 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 C17orf75Q9HAS0 396 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 FAM53CQ9NYF3 392 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 KLHL8Q9P2G9 620 aaPredicted RBP15.22■□□□□ 0.03
GCFC2-211ENST00000541687 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 MX2P20592 715 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 GARTP22102 1010 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 GARSP41250 739 aaKnown RBP15.22■□□□□ 0.03
GCFC2-211ENST00000541687 GCLCP48506 637 aaPredicted RBP15.22■□□□□ 0.03
GCFC2-211ENST00000541687 FMO1Q01740 532 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 OTUD4Q01804 1114 aaKnown RBP15.22■□□□□ 0.03
GCFC2-211ENST00000541687 CNTN2Q02246 1040 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 TAF12Q16514 161 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 QPCTQ16769 361 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 HEATR6Q6AI08 1181 aaKnown RBP15.22■□□□□ 0.03
GCFC2-211ENST00000541687 MFSD7Q6UXD7 560 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 TRIM42Q8IWZ5 723 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 SEMA4DQ92854 862 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 CYP4F11Q9HBI6 524 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 CISHQ9NSE2 258 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.22■□□□□ 0.03
GCFC2-211ENST00000541687 WHRNQ9P202 907 aa15.22■□□□□ 0.03
GCFC2-211ENST00000541687 RPS6KA5O75582 802 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 ZWINTO95229 277 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 AP1B1Q10567 949 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 BMT2Q1RMZ1 405 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 ATG16L1Q676U5 607 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 EFCAB12Q6NXP0 572 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 PDZD4Q76G19 769 aaPredicted RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 CCDC60Q8IWA6 550 aaPredicted RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 CCDC124Q96CT7 223 aaKnown RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 DCLK3Q9C098 648 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 PIK3CDO00329 1044 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 LUC7L3O95232 432 aaKnown RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 SUPT20HL2P0C7V6 817 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 CCNA1P78396 465 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 ASPHQ12797 758 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 MAP7Q14244 749 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 AMHR2Q16671 573 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 DPY19L2Q6NUT2 758 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 CPNE8Q86YQ8 564 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 LRRC57Q8N9N7 239 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 ACTL9Q8TC94 416 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 GRAMD1AQ96CP6 724 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 SPATS2LQ9NUQ6 558 aaKnown RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 GPATCH2LQ9NWQ4 482 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 ZC3H7BQ9UGR2 993 aaKnown RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 HAO1Q9UJM8 370 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 DNPEPQ9ULA0 475 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 VWA5AO00534 786 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 ETS1P14921 441 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 PTK7Q13308 1070 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 TTLL4Q14679 1199 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 DUPD1Q68J44 220 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 LONP2Q86WA8 852 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 ABRAQ8N0Z2 381 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 DDX27Q96GQ7 796 aaKnown RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 MMP19Q99542 508 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 PHTF1Q9UMS5 762 aa15.21■□□□□ 0.03
GCFC2-211ENST00000541687 SMG5Q9UPR3 1016 aaKnown RBP15.21■□□□□ 0.03
GCFC2-211ENST00000541687 PHRF1Q9P1Y6 1649 aaKnown RBP15.21■□□□□ 0.02
GCFC2-211ENST00000541687 CDH8P55286 799 aa15.21■□□□□ 0.02
GCFC2-211ENST00000541687 COPS2P61201 443 aa15.21■□□□□ 0.02
GCFC2-211ENST00000541687 APOBEC3FQ8IUX4 373 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms