RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SELPP16109 830 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ABCB4P21439 1286 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 MLH1P40692 756 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ICE2Q659A1 982 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 RPS6KC1Q96S38 1066 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 MMS19Q96T76 1030 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 GAD1Q99259 594 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ISCUQ9H1K1 167 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 FAM53CQ9NYF3 392 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 GIT1Q9Y2X7 761 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 MRFAP1Q9Y605 127 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 THAP12O43422 761 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ZMYND10O75800 440 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 TMEM253P0C7T8 217 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ACTN2P35609 894 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ATN1P54259 1190 aaPredicted RBP9.25□□□□□ -0.93
THBS3-210ENST00000541576 CDH8P55286 799 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 AGMOQ6ZNB7 445 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 RNF169Q8NCN4 708 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ARHGEF26Q96DR7 871 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 PPP1R10Q96QC0 940 aaKnown RBP9.25□□□□□ -0.93
THBS3-210ENST00000541576 SDCBP2Q9H190 292 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ANO9A1A5B4 782 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 PIRO00625 290 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 SKIP12755 728 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 LIG3P49916 1009 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 SOX4Q06945 474 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 CLEC16AQ2KHT3 1053 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 TTC39CQ8N584 583 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 PGBD4Q96DM1 585 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 ZNF560Q96MR9 790 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 THAP2Q9H0W7 228 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 GOLGA2P5Q9HBQ8 144 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 SLC38A7Q9NVC3 462 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 SNX9Q9Y5X1 595 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 A0A0A6YYK5 440 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 GRID2IPA4D2P6 1211 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 ARL5CA6NH57 179 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 SRGAP2O75044 1071 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 CILPO75339 1184 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 PALMO75781 387 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 PNPLA4P41247 253 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 NOP2P46087 812 aaKnown RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 IFI16Q16666 785 aaKnown RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 PAPD7Q5XG87 772 aaKnown RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 TRIM72Q6ZMU5 477 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 GSTCDQ8NEC7 633 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 ZNF606Q8WXB4 792 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 RIN2Q8WYP3 895 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 ZSWIM1Q9BR11 485 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 FAM124BQ9H5Z6 455 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 RSAD1Q9HA92 442 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 CHORDC1Q9UHD1 332 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 EFCAB8A8MWE9 144 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 PITPNM1O00562 1244 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 NCK2O43639 380 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 THP07101 528 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 MNAT1P51948 309 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 LBX1P52954 281 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 PKN2Q16513 984 aaKnown RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 RFFLQ8WZ73 363 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 ARMC5Q96C12 935 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 GOLPH3Q9H4A6 298 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 OSGEPQ9NPF4 335 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 CDC23Q9UJX2 597 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 BARX2Q9UMQ3 279 aaPredicted RBP9.24□□□□□ -0.93
THBS3-210ENST00000541576 PCDHGC5Q9Y5F6 944 aa9.24□□□□□ -0.93
THBS3-210ENST00000541576 NCANO14594 1321 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 CYP1A1P04798 512 aaPredicted RBP9.23□□□□□ -0.93
THBS3-210ENST00000541576 PAEPP09466 180 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 UNGP13051 313 aaPredicted RBP9.23□□□□□ -0.93
THBS3-210ENST00000541576 CD19P15391 556 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 LRPAP1P30533 357 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 TAF6P49848 677 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 SCNN1GP51170 649 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 RAD23BP54727 409 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 INCA1Q0VD86 236 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 ACAD10Q6JQN1 1059 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 SLC39A5Q6ZMH5 540 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 SLC35G2Q8TBE7 412 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 CYFIP2Q96F07 1278 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 TLR10Q9BXR5 811 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 UBN1Q9NPG3 1134 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 HMGXB4Q9UGU5 601 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.23□□□□□ -0.93
THBS3-210ENST00000541576 FTCDO95954 541 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 NSFP46459 744 aaKnown RBP9.23□□□□□ -0.93
THBS3-210ENST00000541576 AFF1P51825 1210 aaKnown RBP9.23□□□□□ -0.93
THBS3-210ENST00000541576 GPC5P78333 572 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 MRPS25P82663 173 aaKnown RBP9.23□□□□□ -0.93
THBS3-210ENST00000541576 NAA35Q5VZE5 725 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 ANKRD33Q7Z3H0 272 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 ECHDC2Q86YB7 292 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 PASD1Q8IV76 773 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 LRRC57Q8N9N7 239 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 SLC4A11Q8NBS3 891 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms