RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PEX3P56589 373 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 YWHAHQ04917 246 aaPredicted RBP12.87□□□□□ -0.35
COPA-205ENST00000541366 RING1Q06587 406 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 SLC10A6Q3KNW5 377 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 KIAA1211LQ6NV74 962 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 APBB1IPQ7Z5R6 666 aaPredicted RBP12.87□□□□□ -0.35
COPA-205ENST00000541366 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
COPA-205ENST00000541366 DAW1Q8N136 415 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 TM6SF1Q9BZW5 370 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 EBF3Q9H4W6 596 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 BRMS1Q9HCU9 246 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
COPA-205ENST00000541366 BCLAF3A2AJT9 711 aaKnown RBP12.86□□□□□ -0.35
COPA-205ENST00000541366 PATE3B3GLJ2 98 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 M0QZQ0 153 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 PPEF2O14830 753 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 AKAP3O75969 853 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 REC8O95072 547 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 MCF2P10911 925 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 ARSAP15289 507 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 PROZP22891 400 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 GPR17Q13304 367 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 PLD1Q13393 1074 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 LRSAM1Q6UWE0 723 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 MPZL3Q6UWV2 235 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 RIN3Q8TB24 985 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 KIFAP3Q92845 792 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 PSMG2Q969U7 264 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 FAM83CQ9BQN1 747 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 SLC46A2Q9BY10 475 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
COPA-205ENST00000541366 IL21Q9HBE4 155 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 OBP2AQ9NY56 170 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 PHLPP2Q6ZVD8 1323 aa12.86□□□□□ -0.35
COPA-205ENST00000541366 THADAQ6YHU6 1953 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 PCNX2A6NKB5 2137 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 LARGE1O95461 756 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 MCM2P49736 904 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 GRSF1Q12849 480 aaKnown RBP eCLIP12.85□□□□□ -0.35
COPA-205ENST00000541366 RUNX3Q13761 415 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 ELF2Q15723 593 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 DAB2IPQ5VWQ8 1189 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 DEFB124Q8NES8 71 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 ZCCHC14Q8WYQ9 949 aaKnown RBP12.85□□□□□ -0.35
COPA-205ENST00000541366 EZH1Q92800 747 aaPredicted RBP12.85□□□□□ -0.35
COPA-205ENST00000541366 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 ARHGAP28Q9P2N2 729 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 ANKFY1Q9P2R3 1169 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 CELSR3Q9NYQ7 3312 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 ANK1P16157 1881 aa12.85□□□□□ -0.35
COPA-205ENST00000541366 ZNF638Q14966 1978 aaKnown RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 ANTXRLA6NF34 631 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 CDX4O14627 284 aaPredicted RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 SLC16A4O15374 487 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 JAK2O60674 1132 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 ATG13O75143 517 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 HIP1RO75146 1068 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 CXCL8P10145 99 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 ATF6P18850 670 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 NMT1P30419 496 aaKnown RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 GBP1P32455 592 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 GALK1P51570 392 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 ZNF174Q15697 407 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 UAP1L1Q3KQV9 507 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 DSTYKQ6XUX3 929 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 CENPQQ7L2Z9 268 aaPredicted RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 USP37Q86T82 979 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 CAMKK1Q8N5S9 505 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 RPLP0P6Q8NHW5 317 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 GIPC2Q8TF65 315 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 WASF1Q92558 559 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 SEPT5Q99719 369 aaPredicted RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 HAPLN2Q9GZV7 340 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 TMEM134Q9H6X4 195 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 KMT5AQ9NQR1 393 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 THG1LQ9NWX6 298 aaKnown RBP12.84□□□□□ -0.35
COPA-205ENST00000541366 KIAA1024Q9UPX6 916 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 ASB3Q9Y575 518 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 ITPR1Q14643 2758 aa12.84□□□□□ -0.35
COPA-205ENST00000541366 OR6C75A6NL08 312 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 E9PMD0 336 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 HYAL3O43820 417 aaPredicted RBP12.83□□□□□ -0.36
COPA-205ENST00000541366 RHOBTB1O94844 696 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 OR52Z1P0C646 297 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 AARSP49588 968 aaKnown RBP eCLIP12.83□□□□□ -0.364e-7■□□□□ 9.5
COPA-205ENST00000541366 IRX4P78413 519 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 MAPK7Q13164 816 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 OVOS1Q6IE37 1185 aa12.83□□□□□ -0.36
COPA-205ENST00000541366 CMTM8Q8IZV2 173 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms