RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SOWAHAQ2M3V2 549 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 WSCD1Q658N2 575 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 LILRA6Q6PI73 481 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 DCP1BQ8IZD4 617 aaKnown RBP20.12■□□□□ 0.81
VPS33A-205ENST00000541169 ADGRF2Q8IZF7 708 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 RHOBTB2Q9BYZ6 727 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 UBE2ZQ9H832 354 aaPredicted RBP20.12■□□□□ 0.81
VPS33A-205ENST00000541169 CYP3A43Q9HB55 503 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 L1RE1Q9UN81 338 aa20.12■□□□□ 0.81
VPS33A-205ENST00000541169 MYO7AQ13402 2215 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 SYCE3A1L190 88 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 GTPBP10A4D1E9 387 aaKnown RBP20.11■□□□□ 0.81
VPS33A-205ENST00000541169 ABLIM3O94929 683 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 CLSTN1O94985 981 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 ATF2P15336 505 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 WARSP23381 471 aaKnown RBP20.11■□□□□ 0.81
VPS33A-205ENST00000541169 HOXA9P31269 272 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 TSPY1Q01534 308 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 ITIH3Q06033 890 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 GPR17Q13304 367 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 MAN2A1Q16706 1144 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 ZSCAN23Q3MJ62 389 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 ANO6Q4KMQ2 910 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 LIN9Q5TKA1 542 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 IRF2BP1Q8IU81 584 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 TAS1R2Q8TE23 839 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 FAM81BQ96LP2 452 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 DNAJC25Q9H1X3 360 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 SNX25Q9H3E2 840 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 MMRN2Q9H8L6 949 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 SFXN1Q9H9B4 322 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 ZDHHC7Q9NXF8 308 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 THEGQ9P2T0 379 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 NXF1Q9UBU9 619 aaKnown RBP20.11■□□□□ 0.81
VPS33A-205ENST00000541169 AFF4Q9UHB7 1163 aaKnown RBP20.11■□□□□ 0.81
VPS33A-205ENST00000541169 TIMM13Q9Y5L4 95 aaPredicted RBP20.11■□□□□ 0.81
VPS33A-205ENST00000541169 TSC2P49815 1807 aa20.11■□□□□ 0.81
VPS33A-205ENST00000541169 TGM5O43548 720 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 HNRNPA1P09651 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 CPB1P15086 417 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 ELF1P32519 619 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 ZNF165P49910 485 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 NOP14P78316 857 aaKnown RBP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 ROR1Q01973 937 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 NFE2Q16621 373 aaPredicted RBP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 ANKRD54Q6NXT1 300 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 C11orf57Q6ZUT1 292 aaPredicted RBP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 PALB2Q86YC2 1186 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 TMEM130Q8N3G9 435 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 CMASQ8NFW8 434 aaPredicted RBP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 ATXN2LQ8WWM7 1075 aaKnown RBP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 FUCA2Q9BTY2 467 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 NIF3L1Q9GZT8 377 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 DDX43Q9NXZ2 648 aaKnown RBP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 FBXW11Q9UKB1 542 aa20.1■□□□□ 0.81
VPS33A-205ENST00000541169 MTCL1Q9Y4B5 1905 aaKnown RBP20.1■□□□□ 0.81
VPS33A-205ENST00000541169 SPDYE4A6NLX3 237 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 KCNJ18B7U540 433 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 PAPLNO95428 1278 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 GLP2RO95838 553 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 POU2F2P09086 479 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 RPL17P18621 184 aaKnown RBP20.09■□□□□ 0.81
VPS33A-205ENST00000541169 TBXAS1P24557 533 aaPredicted RBP20.09■□□□□ 0.81
VPS33A-205ENST00000541169 GTF2F1P35269 517 aaKnown RBP eCLIP20.09■□□□□ 0.81
VPS33A-205ENST00000541169 GNL1P36915 607 aaPredicted RBP20.09■□□□□ 0.81
VPS33A-205ENST00000541169 YWHAEP62258 255 aaKnown RBP20.09■□□□□ 0.81
VPS33A-205ENST00000541169 KCNJ12Q14500 433 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 LEXMQ3ZCV2 418 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 CBWD6Q4V339 395 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 TCP11X2Q5H9J9 407 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 CBWD3Q5JTY5 395 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 CBWD5Q5RIA9 395 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 CDKAL1Q5VV42 579 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 CES5AQ6NT32 575 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 EP400NLQ6ZTU2 488 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 UNC93AQ86WB7 457 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 TCEAL8Q8IYN2 117 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 KREMEN2Q8NCW0 462 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 FAM84AQ96KN4 292 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 TNIP3Q96KP6 325 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 TUBGCP2Q9BSJ2 902 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 BCO2Q9BYV7 579 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 ZCWPW1Q9H0M4 648 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 CDH9Q9ULB4 789 aa20.09■□□□□ 0.81
VPS33A-205ENST00000541169 LTBRP36941 435 aa20.08■□□□□ 0.81
VPS33A-205ENST00000541169 TPM4P67936 248 aa20.08■□□□□ 0.81
VPS33A-205ENST00000541169 LLGL2Q6P1M3 1020 aa20.08■□□□□ 0.81
VPS33A-205ENST00000541169 MSLNLQ96KJ4 702 aa20.08■□□□□ 0.81
VPS33A-205ENST00000541169 ABCB6Q9NP58 842 aa20.08■□□□□ 0.81
VPS33A-205ENST00000541169 MAN1C1Q9NR34 630 aa20.08■□□□□ 0.81
VPS33A-205ENST00000541169 CD207Q9UJ71 328 aa20.08■□□□□ 0.81
VPS33A-205ENST00000541169 WDR27A2RRH5 827 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 BECN2A8MW95 431 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 EPCAMP16422 314 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 KCNA5P22460 613 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 PLD1Q13393 1074 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 RSPO2Q6UXX9 243 aaPredicted RBP20.07■□□□□ 0.8
VPS33A-205ENST00000541169 GLYCTKQ8IVS8 523 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 VN1R2Q8NFZ6 395 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms