RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 RASA4BC9J798 803 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 RASA4O43374 803 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 AP1G2O75843 785 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PIAS1O75925 651 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 TFDP2Q14188 446 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 FYB2Q5VWT5 728 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 NUGGCQ68CJ6 796 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 CENPUQ71F23 418 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 WHAMMQ8TF30 809 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 SEMA4DQ92854 862 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 LENG9Q96B70 501 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PKNOX2Q96KN3 472 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 RUNDC3BQ96NL0 473 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 CACNG4Q9UBN1 327 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 HSPA6P17066 643 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 EFHC2Q5JST6 749 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PALB2Q86YC2 1186 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 JAMLQ86YT9 394 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 APOL2Q9BQE5 337 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 LBHD1Q9BQE6 289 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 TACO1Q9BSH4 297 aaKnown RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 DDIT4Q9NX09 232 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 SCN11AQ9UI33 1791 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 MANSC4A6NHS7 340 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PODXLO00592 558 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 KCNA2P16389 499 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 MARCKSL1P49006 195 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PSEN2P49810 448 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 AP3M2P53677 418 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 GABPB1Q06547 395 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 RCN2Q14257 317 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PCSK7Q16549 785 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 ACCSLQ4AC99 568 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 FAM133BQ5BKY9 247 aaKnown RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 CCNI2Q6ZMN8 369 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 TRIM72Q6ZMU5 477 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 RNF135Q8IUD6 432 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 CCDC195A0A1B0GUA6 201 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PHF20L1A8MW92 1017 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 NT5C1B-RDH14C9J2C7 533 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 M0QYT0 321 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 OPLAHO14841 1288 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 ARIH2O95376 493 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 CST3P01034 146 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 CHRNA3P32297 505 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 HTRA3P83110 453 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 DEUP1Q05D60 604 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 MDH1BQ5I0G3 518 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 TMEM63BQ5T3F8 832 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 TDRD10Q5VZ19 366 aaKnown RBP10.05□□□□□ -0.8
TTC39C-203ENST00000540918 ABHD15Q6UXT9 468 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 CACNA2D3Q8IZS8 1091 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 LRRC8CQ8TDW0 803 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 TLR10Q9BXR5 811 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 UVRAGQ9P2Y5 699 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 GTF3C4Q9UKN8 822 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 DOT1LQ8TEK3 1739 aa10.05□□□□□ -0.8
TTC39C-203ENST00000540918 IL18RAPO95256 599 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 GLI1P08151 1106 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 GSTA1P08263 222 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 GSTA2P09210 222 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 KITP10721 976 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 AKR1A1P14550 325 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ETFBP38117 255 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 MLH1P40692 756 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ARHGAP25P42331 645 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 PTPN11Q06124 597 aaPredicted RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 DEFB115Q30KQ5 88 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 BBOF1Q8ND07 529 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 SMC1BQ8NDV3 1235 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 TEPSINQ96N21 525 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ADAM2Q99965 735 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ELAC2Q9BQ52 826 aaKnown RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 TMEM121Q9BTD3 319 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 BAIAP2L1Q9UHR4 511 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 TSPAN16Q9UKR8 245 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ARFGEF2Q9Y6D5 1785 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF536O15090 1300 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 F8VP50 259 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 THP07101 528 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CCDC130P13994 396 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 SCNN1GP51170 649 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 ROR1Q01973 937 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CUL1Q13616 776 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 SLC12A1Q13621 1099 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 GKAP1Q5VSY0 366 aaPredicted RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 NIPA1Q7RTP0 329 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 C4orf33Q8N1A6 199 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CDT1Q9H211 546 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 VPS11Q9H270 941 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 UBQLN1Q9UMX0 589 aaKnown RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CHMP2BQ9UQN3 213 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms