RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ARMCX5Q6P1M9 558 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 SHC4Q6S5L8 630 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 ASCL5Q7RTU5 278 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 DNAJB7Q7Z6W7 309 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 CCDC65Q8IXS2 484 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 ATAD1Q8NBU5 361 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 SHKBP1Q8TBC3 707 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 PSMG2Q969U7 264 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 E2F7Q96AV8 911 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 PGLYRP2Q96PD5 576 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 C7orf25Q9BPX7 421 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 FAM213AQ9BRX8 229 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 FOXQ1Q9C009 403 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 TRIM9Q9C026 710 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 F5P12259 2224 aa14.16□□□□□ -0.14
SEMA4D-223ENST00000540475 GREB1Q4ZG55 1949 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 ARNTLO00327 626 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 ZSCAN22P10073 491 aaPredicted RBP14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 IDEP14735 1019 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 PSMC3P17980 439 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 ALDH1A3P47895 512 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 TUFMP49411 452 aaKnown RBP14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 SV2CQ496J9 727 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 VITQ6UXI7 678 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 LRRTM3Q86VH5 581 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 C1orf210Q8IVY1 113 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 MFSD6LQ8IWD5 586 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 MAML2Q8IZL2 1156 aaPredicted RBP14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 LRRC52Q8N7C0 313 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 PDILTQ8N807 584 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 C1orf127Q8N9H9 656 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 IQUBQ8NA54 791 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 SPATA18Q8TC71 538 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 ZNF507Q8TCN5 953 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 CACTINQ8WUQ7 758 aaKnown RBP14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 DEPDC1BQ8WUY9 529 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 CBWD1Q9BRT8 395 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 MKNK1Q9BUB5 465 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 SEMA4AQ9H3S1 761 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 LTB4R2Q9NPC1 389 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 GDAP2Q9NXN4 497 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 SLC27A5Q9Y2P5 690 aa14.15□□□□□ -0.14
SEMA4D-223ENST00000540475 EIF3DO15371 548 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 PRPF6O94906 941 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 FGF19O95750 216 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 MYL4P12829 197 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 RPS9P46781 194 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 AMPD3Q01432 767 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 TEAD2Q15562 447 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 ZNF528Q3MIS6 628 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 WSCD1Q658N2 575 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 MAMSTRQ6ZN01 415 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 GAREM2Q75VX8 874 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 LIMS2Q7Z4I7 341 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 FRMD5Q7Z6J6 570 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 METTL23Q86XA0 190 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 SYCP3Q8IZU3 236 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 THEM5Q8N1Q8 247 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 TTC9BQ8N6N2 239 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 ZSCAN18Q8TBC5 510 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 SPPL2BQ8TCT7 592 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 IRF7Q92985 503 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 ZNF560Q96MR9 790 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 TRMT61BQ9BVS5 477 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 MAGEF1Q9HAY2 307 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 ZNF334Q9HCZ1 680 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 RBAKQ9NYW8 714 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 MTF2Q9Y483 593 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 ZNF638Q14966 1978 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 NCANO14594 1321 aa14.14□□□□□ -0.15
SEMA4D-223ENST00000540475 PTPRDP23468 1912 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 PTPRZ1P23471 2315 aaPredicted RBP14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 FAM170BA6NMN3 283 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 LRRN2O75325 713 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 F13A1P00488 732 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 GJA1P17302 382 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 ATF6P18850 670 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 RFX1P22670 979 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 SNRPFP62306 86 aaKnown RBP14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 FCHO2Q0JRZ9 810 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 SLC39A12Q504Y0 691 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 SCARA3Q6AZY7 606 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 ZNF852Q6ZMS4 543 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 STXBP4Q6ZWJ1 553 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 ITIH5Q86UX2 942 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 GLIS3Q8NEA6 775 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 LEO1Q8WVC0 666 aaPredicted RBP14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 NKD2Q969F2 451 aaPredicted RBP14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 PKMYT1Q99640 499 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 ACBD6Q9BR61 282 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 IL21Q9HBE4 155 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 OBP2AQ9NY56 170 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 SIX4Q9UIU6 781 aa14.13□□□□□ -0.15
SEMA4D-223ENST00000540475 RCOR1Q9UKL0 485 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms