RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 LRRC32Q14392 662 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 SLC39A12Q504Y0 691 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 L1TD1Q5T7N2 865 aaKnown RBP16.52■□□□□ 0.24
UBE3B-211ENST00000539843 ERMP1Q7Z2K6 904 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 DNAJB7Q7Z6W7 309 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-211ENST00000539843 SPPL2BQ8TCT7 592 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 LRRC15Q8TF66 581 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
UBE3B-211ENST00000539843 FIZ1Q96SL8 496 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 C8orf33Q9H7E9 229 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-211ENST00000539843 TMEM206Q9H813 350 aa16.52■□□□□ 0.24
UBE3B-211ENST00000539843 FBXO2Q9UK22 296 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-211ENST00000539843 DOCK6Q96HP0 2047 aa16.52■□□□□ 0.23
UBE3B-211ENST00000539843 MIA3Q5JRA6 1907 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 PPEF2O14830 753 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 CHADO15335 359 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 SYT1P21579 422 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 GABRR2P28476 465 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 CCR3P51677 355 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 MLLT6P55198 1093 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-211ENST00000539843 TFAMQ00059 246 aaKnown RBP16.51■□□□□ 0.23
UBE3B-211ENST00000539843 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 PTPAQ15257 358 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 ARHGAP29Q52LW3 1261 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 GPR158Q5T848 1215 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 CCDC65Q8IXS2 484 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 GPR161Q8N6U8 529 aaKnown RBP16.51■□□□□ 0.23
UBE3B-211ENST00000539843 NOC3LQ8WTT2 800 aaKnown RBP16.51■□□□□ 0.23
UBE3B-211ENST00000539843 ZSWIM3Q96MP5 696 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 ZCWPW1Q9H0M4 648 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 OLFML3Q9NRN5 406 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 THG1LQ9NWX6 298 aaKnown RBP16.51■□□□□ 0.23
UBE3B-211ENST00000539843 OBP2AQ9NY56 170 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 RAB23Q9ULC3 237 aa16.51■□□□□ 0.23
UBE3B-211ENST00000539843 KPNA7A9QM74 516 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
UBE3B-211ENST00000539843 HUS1O60921 280 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 MOSPD3O75425 235 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 GARTP22102 1010 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 RESTQ13127 1097 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 STK38Q15208 465 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 NFE2Q16621 373 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-211ENST00000539843 TMC8Q8IU68 726 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 ARID3BQ8IVW6 561 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-211ENST00000539843 OR10T2Q8NGX3 314 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 CHRDQ9H2X0 955 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 ABI2Q9NYB9 513 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-211ENST00000539843 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-211ENST00000539843 TBC1D7Q9P0N9 293 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 NOTCH4Q99466 2003 aa16.5■□□□□ 0.23
UBE3B-211ENST00000539843 MYMKA6NI61 221 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 VNN2O95498 520 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 TMEM191BP0C7N4 346 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 AMPD3Q01432 767 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 MYL7Q01449 175 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 MTAPQ13126 283 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 USP49Q70CQ1 688 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 BRSK2Q8IWQ3 736 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 KIAA2013Q8IYS2 634 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 MAML2Q8IZL2 1156 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-211ENST00000539843 TMEM130Q8N3G9 435 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 ZNF396Q96N95 335 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-211ENST00000539843 CLIC6Q96NY7 704 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 CRISPLD1Q9H336 500 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 TASP1Q9H6P5 420 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 LMAN1LQ9HAT1 526 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 PRMT8Q9NR22 394 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-211ENST00000539843 PANK4Q9NVE7 773 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 GMEB2Q9UKD1 530 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 ITGA11Q9UKX5 1188 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 PCDHB5Q9Y5E4 795 aa16.49■□□□□ 0.23
UBE3B-211ENST00000539843 MORC2Q9Y6X9 1032 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-211ENST00000539843 TISP43B9A030 160 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 PPP1R37O75864 691 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 KRT19P08727 400 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 SDHBP21912 280 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 CCNE1P24864 410 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 DDX6P26196 483 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE3B-211ENST00000539843 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
UBE3B-211ENST00000539843 AVPR1AP37288 418 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 FCHO2Q0JRZ9 810 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 SLC39A14Q15043 492 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 SURF1Q15526 300 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 WSCD1Q658N2 575 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 LRRC52Q8N7C0 313 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 BPIFB1Q8TDL5 484 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 EXOC4Q96A65 974 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 SAAL1Q96ER3 474 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 ANKRD36BP1Q96IX9 119 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 TMEM209Q96SK2 561 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 LRRC3Q9BY71 257 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 UXTQ9UBK9 157 aaPredicted RBP16.48■□□□□ 0.23
UBE3B-211ENST00000539843 USP34Q70CQ2 3546 aa16.48■□□□□ 0.23
UBE3B-211ENST00000539843 STX6O43752 255 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 EXTL3O43909 919 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms