RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 DPH6Q7L8W6 267 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 OR6B3Q8NGW1 331 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 SLC30A5Q8TAD4 765 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 DDX1Q92499 740 aaKnown RBP17.23■□□□□ 0.35
TRAF3-204ENST00000539721 PPP1R13BQ96KQ4 1090 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 TWNKQ96RR1 684 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 ELOVL4Q9GZR5 314 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 LUC7LQ9NQ29 371 aaKnown RBP17.23■□□□□ 0.35
TRAF3-204ENST00000539721 NAGPAQ9UK23 515 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 PCDHA13Q9Y5I0 950 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 PAEPP09466 180 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 PAX3P23760 479 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 DEFB103AP81534 67 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 COL13A1Q5TAT6 717 aaPredicted RBP17.23■□□□□ 0.35
TRAF3-204ENST00000539721 ALKBH5Q6P6C2 394 aaKnown RBP17.23■□□□□ 0.35
TRAF3-204ENST00000539721 REXO1L1PQ8IX06 675 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 ADGRF2Q8IZF7 708 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 SLC4A11Q8NBS3 891 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 HASPINQ8TF76 798 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 TOP1MTQ969P6 601 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 TMEM176AQ96HP8 235 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 NT5C1AQ9BXI3 368 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 PDCL3Q9H2J4 239 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 SNX25Q9H3E2 840 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 DNAJB4Q9UDY4 337 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 KIF4AO95239 1232 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 CD19P15391 556 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 SYN1P17600 705 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 BRD2P25440 801 aaKnown RBP17.22■□□□□ 0.35
TRAF3-204ENST00000539721 MKI67P46013 3256 aaKnown RBP17.22■□□□□ 0.35
TRAF3-204ENST00000539721 AARSP49588 968 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAF3-204ENST00000539721 VAV2P52735 878 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 TIGD5Q53EQ6 642 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 OTOP2Q7RTS6 562 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 LIMS2Q7Z4I7 341 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 LRRC43Q8N309 656 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 KBTBD7Q8WVZ9 684 aa17.22■□□□□ 0.35
TRAF3-204ENST00000539721 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 TSC2P49815 1807 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 A0A0U1RQJ8 604 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 GOLGA6L9A6NEM1 432 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 ZBBXA8MT70 800 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 A8MXQ7 604 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 TMCO5BA8MYB1 307 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 ZNF500O60304 480 aaPredicted RBP17.21■□□□□ 0.35
TRAF3-204ENST00000539721 DGKIO75912 1065 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 FGBP02675 491 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 ODC1P11926 461 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 WARSP23381 471 aaKnown RBP17.21■□□□□ 0.35
TRAF3-204ENST00000539721 GNL1P36915 607 aaPredicted RBP17.21■□□□□ 0.35
TRAF3-204ENST00000539721 BRCC3P46736 316 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 C10orf76Q5T2E6 689 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 CD300LGQ6UXG3 332 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 C16orf59Q7L2K0 433 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 UNC93AQ86WB7 457 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 PALB2Q86YC2 1186 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 TXLNBQ8N3L3 684 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 ZNF606Q8WXB4 792 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 ATRIPQ8WXE1 791 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 PCDHB18PQ96TA0 734 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 NENFQ9UMX5 172 aa17.21■□□□□ 0.35
TRAF3-204ENST00000539721 PRG3Q9Y2Y8 225 aaPredicted RBP17.21■□□□□ 0.35
TRAF3-204ENST00000539721 F8W810 466 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 I3L4J1 428 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 FAM163BP0C2L3 166 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 ARHGAP29Q52LW3 1261 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 WSCD1Q658N2 575 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 FAM117BQ6P1L5 589 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 ZNF365Q70YC5 407 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 TMEM86AQ8N2M4 240 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 HEXIM2Q96MH2 286 aaKnown RBP17.2■□□□□ 0.34
TRAF3-204ENST00000539721 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 LZTFL1Q9NQ48 299 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 HCSTQ9UBK5 93 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 ZMYND8Q9ULU4 1186 aaPredicted RBP17.2■□□□□ 0.34
TRAF3-204ENST00000539721 TFR2Q9UP52 801 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 CCDC85CA6NKD9 419 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 MED7O43513 233 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 ITGB1P05556 798 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 VDRP11473 427 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 SSTR3P32745 418 aaPredicted RBP17.2■□□□□ 0.34
TRAF3-204ENST00000539721 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
TRAF3-204ENST00000539721 TMCO2Q7Z6W1 182 aaPredicted RBP17.2■□□□□ 0.34
TRAF3-204ENST00000539721 OSTM1Q86WC4 334 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 TFAP2BQ92481 460 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 DPF3Q92784 378 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 TMEM175Q9BSA9 504 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 NME7Q9Y5B8 376 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 COL4A6Q14031 1691 aa17.2■□□□□ 0.34
TRAF3-204ENST00000539721 FAM170AA1A519 330 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 ARHGEF37A1IGU5 675 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 M0QZQ0 153 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 NRP1O14786 923 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 ALDH2P05091 517 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 CFHP08603 1231 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 PDGFRBP09619 1106 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 SLC11A1P49279 550 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms