RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SSTR3P32745 418 aaPredicted RBP18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 ASPAP45381 313 aa18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 MNAT1P51948 309 aa18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 BPIFB4P59827 614 aa18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 PTPROQ16827 1216 aa18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 KDM7AQ6ZMT4 941 aa18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 LRRC57Q8N9N7 239 aa18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 TRIM6Q9C030 488 aaPredicted RBP18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 CISHQ9NSE2 258 aa18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 DDX20Q9UHI6 824 aaKnown RBP18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 NOC2LQ9Y3T9 749 aaKnown RBP18.18■□□□□ 0.5
PCDHB17P-201ENST00000539533 CTSHP09668 335 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 HNRNPH1P31943 449 aaKnown RBP18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 MRPS6P82932 125 aaKnown RBP18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 WDR72Q3MJ13 1102 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 ZNF394Q53GI3 561 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 MEI1Q5TIA1 1274 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 FBXW10Q5XX13 1052 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 PIK3R5Q8WYR1 880 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 RFFLQ8WZ73 363 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 KIF12Q96FN5 646 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 ZMAT2Q96NC0 199 aaKnown RBP18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 KRT12Q99456 494 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 APOL6Q9BWW8 343 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 COG5Q9UP83 839 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 C2CD2Q9Y426 696 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 CDY2AQ9Y6F7 541 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 TRIP11Q15643 1979 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 NCANO14594 1321 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 AKAP5P24588 427 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 AXLP30530 894 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 GNA15P30679 374 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 POLR2BP30876 1174 aaKnown RBP18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 IFI16Q16666 785 aaKnown RBP18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 B4GALNT4Q76KP1 1039 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 SERINC5Q86VE9 423 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 FAM228AQ86W67 206 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 ZNF296Q8WUU4 475 aaPredicted RBP18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 CASKIN2Q8WXE0 1202 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 DPP3Q9NY33 737 aa18.17■□□□□ 0.5
PCDHB17P-201ENST00000539533 ATMINO43313 823 aaPredicted RBP18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 CST5P28325 142 aaPredicted RBP18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 RAP1GAPP47736 663 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 ZNF132P52740 706 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 GSCP56915 257 aaPredicted RBP18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 CLEC16AQ2KHT3 1053 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 UBXN11Q5T124 520 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 APBB1IPQ7Z5R6 666 aaPredicted RBP18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 CD302Q8IX05 232 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 PXYLP1Q8TE99 480 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 RNPC3Q96LT9 517 aaKnown RBP18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 AGAP1Q9UPQ3 857 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 CHRNA1P02708 482 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 CDH8P55286 799 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 GPC5P78333 572 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 ZNF667Q5HYK9 610 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 EMC10Q5UCC4 262 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 ZNF677Q86XU0 584 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 WHAMMQ8TF30 809 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 SNX27Q96L92 541 aa18.16■□□□□ 0.5
PCDHB17P-201ENST00000539533 ATXN2Q99700 1313 aaKnown RBP18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 RECQL4O94761 1208 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 UNGP13051 313 aaPredicted RBP18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 LSP1P33241 339 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 GLRA4Q5JXX5 417 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 ACAD10Q6JQN1 1059 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 PCSK9Q8NBP7 692 aaKnown RBP18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 CPA5Q8WXQ8 436 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 TAF4BQ92750 862 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 CYFIP2Q96F07 1278 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 CXorf56Q9H5V9 222 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 PLEKHA5Q9HAU0 1116 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 M0QZ92 97 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 BUB1BO60566 1050 aaPredicted RBP18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 INHAP05111 366 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 YARSP54577 528 aaKnown RBP18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 PTGISQ16647 500 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 DAAM2Q86T65 1068 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 PASD1Q8IV76 773 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 HPDLQ96IR7 371 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 KLK14Q9P0G3 267 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 TRPV2Q9Y5S1 764 aa18.15■□□□□ 0.5
PCDHB17P-201ENST00000539533 THAP12O43422 761 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 FKTNO75072 461 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 NR1D1P20393 614 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 RNASE9P60153 205 aaKnown RBP18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 GUCY1A3Q02108 690 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 ALKAL1Q6UXT8 129 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 SLFN11Q7Z7L1 901 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 RNF180Q86T96 592 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 RSPH3Q86UC2 560 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 ZNF606Q8WXB4 792 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 OSBPL7Q9BZF2 842 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 SDCBP2Q9H190 292 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 EPN3Q9H201 632 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 CTTNBP2NLQ9P2B4 639 aa18.14■□□□□ 0.49
PCDHB17P-201ENST00000539533 RAD51CO43502 376 aa18.13■□□□□ 0.49
PCDHB17P-201ENST00000539533 GNRH1P01148 92 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms