RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
CTCFL-212ENST00000539382 GTF3C4Q9UKN8 822 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 PDCD11Q14690 1871 aaKnown RBP11.83□□□□□ -0.52
CTCFL-212ENST00000539382 PIRO00625 290 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 KIF4AO95239 1232 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 CKBP12277 381 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.52
CTCFL-212ENST00000539382 MLH1P40692 756 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 IFI16Q16666 785 aaKnown RBP11.83□□□□□ -0.52
CTCFL-212ENST00000539382 TEX35Q5T0J7 233 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 DENND1BQ6P3S1 775 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 PEX26Q7Z412 305 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 CEP112Q8N8E3 955 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 BEST2Q8NFU1 509 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
CTCFL-212ENST00000539382 C11orf70Q9BRQ4 267 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 STARD7Q9NQZ5 370 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 CYTH4Q9UIA0 394 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 NOD1Q9Y239 953 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 SNX9Q9Y5X1 595 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 ALG6Q9Y672 507 aa11.83□□□□□ -0.52
CTCFL-212ENST00000539382 GPR182O15218 404 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 MTA2O94776 668 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 GJB6O95452 261 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 ATF7P17544 494 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-212ENST00000539382 NSFP46459 744 aaKnown RBP11.82□□□□□ -0.52
CTCFL-212ENST00000539382 NDST1P52848 882 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 PRMT2P55345 433 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 RNASE9P60153 205 aaKnown RBP11.82□□□□□ -0.52
CTCFL-212ENST00000539382 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 DSC3Q14574 896 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 FAM26DQ5JW98 314 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 AGMOQ6ZNB7 445 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 MMS22LQ6ZRQ5 1243 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 C1orf131Q8NDD1 294 aaKnown RBP11.82□□□□□ -0.52
CTCFL-212ENST00000539382 HES6Q96HZ4 224 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 FAXDC2Q96IV6 333 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 PPP1R10Q96QC0 940 aaKnown RBP11.82□□□□□ -0.52
CTCFL-212ENST00000539382 GAD1Q99259 594 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 LPIN3Q9BQK8 851 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 CYP3A43Q9HB55 503 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 ARGLU1Q9NWB6 273 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-212ENST00000539382 TJP2Q9UDY2 1190 aa11.82□□□□□ -0.52
CTCFL-212ENST00000539382 UBQLN1Q9UMX0 589 aaKnown RBP11.82□□□□□ -0.52
CTCFL-212ENST00000539382 CTAGE15A4D2H0 777 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 TMEM110-MUSTN1A8MSY1 372 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 KCNK3O14649 394 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 CTAGE8P0CG41 777 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 CD19P15391 556 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 CYP3A5P20815 502 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 IBSPP21815 317 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 TNNC1P63316 161 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 PTPN11Q06124 597 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 MESDQ14696 234 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 RPS6KA1Q15418 735 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 SOWAHAQ2M3V2 549 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 DCAF12L1Q5VU92 463 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 CTAGE6Q86UF2 777 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 CTAGE4Q8IX94 777 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 KRT222Q8N1A0 295 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 C12orf29Q8N999 325 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 ZNF564Q8TBZ8 553 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 TMEM176AQ96HP8 235 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 BARX2Q9UMQ3 279 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 DDX3YO15523 660 aaKnown RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 MMP8P22894 467 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 MARCKSL1P49006 195 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 MYO1EQ12965 1108 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 PAK2Q13177 524 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 ARHGEF6Q15052 776 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 TRIM72Q6ZMU5 477 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 RTN4RL1Q86UN2 441 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 PHF13Q86YI8 300 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 LRRC52Q8N7C0 313 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 ALG3Q92685 438 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 DEFB118Q96PH6 123 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 ADAM2Q99965 735 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
CTCFL-212ENST00000539382 ADAM22Q9P0K1 906 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 PCDHGC3Q9UN70 934 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 PHF24Q9UPV7 400 aa11.81□□□□□ -0.52
CTCFL-212ENST00000539382 ARL5CA6NH57 179 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 ARVCFO00192 962 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 TLR3O15455 904 aaKnown RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 PAEPP09466 180 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 FGFR1P11362 822 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 COMTP21964 271 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 C2orf54Q08AI8 447 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 MAMLD1Q13495 774 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 DAB2IPQ5VWQ8 1189 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 KRT35Q92764 455 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 GOLGA1Q92805 767 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 PAAF1Q9BRP4 392 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 ANKZF1Q9H8Y5 726 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 ARIH1Q9Y4X5 557 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 ITGA4P13612 1032 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 P4HA1P13674 534 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms