RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PPP1R3GB7ZBB8 358 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 KINO60870 393 aaKnown RBP14.75□□□□□ -0.05
CD9-208ENST00000538834 TNNC2P02585 160 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 NR2F2P24468 414 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 EPHA5P54756 1037 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 TDRD10Q5VZ19 366 aaKnown RBP14.75□□□□□ -0.05
CD9-208ENST00000538834 POTEHQ6S545 545 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 CCDC149Q6ZUS6 474 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 SLC7A14Q8TBB6 771 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 KBTBD7Q8WVZ9 684 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 LRRC3Q9BY71 257 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 LMBRD1Q9NUN5 540 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 HOOK1Q9UJC3 728 aaKnown RBP14.75□□□□□ -0.05
CD9-208ENST00000538834 NME7Q9Y5B8 376 aa14.75□□□□□ -0.05
CD9-208ENST00000538834 CLUHO75153 1309 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 MTMR11A4FU01 709 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 OR4Q2P0C623 313 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 DLATP10515 647 aaKnown RBP14.74□□□□□ -0.05
CD9-208ENST00000538834 TNNI1P19237 187 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 ATICP31939 592 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 SMARCB1Q12824 385 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 PPM1LQ5SGD2 360 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 ANKRD40Q6AI12 368 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 FAM171BQ6P995 826 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 USP37Q86T82 979 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 OSTM1Q86WC4 334 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 CCDC127Q96BQ5 260 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 HPDLQ96IR7 371 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 FNBP1Q96RU3 617 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 ACBD6Q9BR61 282 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 EPHX3Q9H6B9 360 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 C11orf16Q9NQ32 467 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 EPS15L1Q9UBC2 864 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 DNMT3BQ9UBC3 853 aaKnown RBP14.74□□□□□ -0.05
CD9-208ENST00000538834 NR2E1Q9Y466 385 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 INSL5Q9Y5Q6 135 aa14.74□□□□□ -0.05
CD9-208ENST00000538834 TACC1O75410 805 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 MICAL2O94851 1124 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 CCNE1P24864 410 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 RPL13P26373 211 aaKnown RBP14.73□□□□□ -0.05
CD9-208ENST00000538834 PPP1R2P41236 205 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 LRRC63Q05C16 580 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 ADCY1Q08828 1119 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 ADAM9Q13443 819 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 PRSS36Q5K4E3 855 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 LIN9Q5TKA1 542 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 TTI2Q6NXR4 508 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 INTS8Q75QN2 995 aaKnown RBP14.73□□□□□ -0.05
CD9-208ENST00000538834 SV2AQ7L0J3 742 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 PLCD3Q8N3E9 789 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 DHTKD1Q96HY7 919 aaPredicted RBP14.73□□□□□ -0.05
CD9-208ENST00000538834 RPGRIP1Q96KN7 1286 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 MYADMQ96S97 322 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 DUSP9Q99956 384 aaKnown RBP14.73□□□□□ -0.05
CD9-208ENST00000538834 DNAJC25Q9H1X3 360 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 TMLHEQ9NVH6 421 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 CEP72Q9P209 647 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 KIAA1468Q9P260 1216 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 SNX9Q9Y5X1 595 aa14.73□□□□□ -0.05
CD9-208ENST00000538834 HELZP42694 1942 aaKnown RBP14.72□□□□□ -0.05
CD9-208ENST00000538834 NRG2O14511 850 aaPredicted RBP14.72□□□□□ -0.05
CD9-208ENST00000538834 WARSP23381 471 aaKnown RBP14.72□□□□□ -0.05
CD9-208ENST00000538834 PSMC2P35998 433 aaKnown RBP14.72□□□□□ -0.05
CD9-208ENST00000538834 VAMP7P51809 220 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 MYL6P60660 151 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 PPP3CAQ08209 521 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 BFSP1Q12934 665 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 MYO1EQ12965 1108 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 OTOP3Q7RTS5 596 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 GRASPQ7Z6J2 395 aaPredicted RBP14.72□□□□□ -0.05
CD9-208ENST00000538834 TRIML1Q8N9V2 468 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 NOC3LQ8WTT2 800 aaKnown RBP14.72□□□□□ -0.05
CD9-208ENST00000538834 C2orf15Q8WU43 125 aaKnown RBP14.72□□□□□ -0.05
CD9-208ENST00000538834 MED15Q96RN5 788 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.72□□□□□ -0.05
CD9-208ENST00000538834 FRMD4BQ9Y2L6 1034 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 COL4A2P08572 1712 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 KMT2EQ8IZD2 1858 aa14.72□□□□□ -0.05
CD9-208ENST00000538834 ANHXE9PGG2 379 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 CCL16O15467 120 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 DCXO43602 365 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 HUS1O60921 280 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 XYLBO75191 536 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 MOSPD3O75425 235 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 ASS1P00966 412 aaKnown RBP14.71□□□□□ -0.05
CD9-208ENST00000538834 KRT19P08727 400 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 CPB1P15086 417 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 PTPN2P17706 415 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 SSTR3P32745 418 aaPredicted RBP14.71□□□□□ -0.05
CD9-208ENST00000538834 GTF2H1P32780 548 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 LHX1P48742 406 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 ARPP19P56211 112 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 NTHL1P78549 312 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 FKBP3Q00688 224 aaKnown RBP14.71□□□□□ -0.05
CD9-208ENST00000538834 DUSP4Q13115 394 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 INTS6LQ5JSJ4 861 aaKnown RBP14.71□□□□□ -0.05
CD9-208ENST00000538834 CEP135Q66GS9 1140 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 METTL23Q86XA0 190 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 FAM186BQ8IYM0 893 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 THEM5Q8N1Q8 247 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms