RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 RPA3P35244 121 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-209ENST00000538654 STAT3P40763 770 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 IZUMO3Q5VZ72 239 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
SNHG1-209ENST00000538654 C9orf72Q96LT7 481 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 RBM15Q96T37 977 aaKnown RBP eCLIP9.52□□□□□ -0.89
SNHG1-209ENST00000538654 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 ZCWPW1Q9H0M4 648 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 JMJD4Q9H9V9 463 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 HOMER2Q9NSB8 354 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 CIDEBQ9UHD4 219 aa9.52□□□□□ -0.89
SNHG1-209ENST00000538654 TAF1P21675 1872 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 MAGEC1O60732 1142 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 SPATA31C1P0DKV0 1188 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 ESRRAP11474 423 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 KLRK1P26718 216 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 SLC1A1P43005 524 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 RAP1GDS1P52306 607 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 PSMC6P62333 389 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 ZBTB16Q05516 673 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 BFSP1Q12934 665 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 WDR72Q3MJ13 1102 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 C16orf54Q6UWD8 224 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 SLF2Q8IX21 1173 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 ADGRF4Q8IZF3 695 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 PPP2R3CQ969Q6 453 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 ZNF653Q96CK0 615 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 FAM20AQ96MK3 541 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 CHST7Q9NS84 486 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 DMAC2Q9NW81 257 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 LUZP4Q9P127 313 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 CDK5RAP2Q96SN8 1893 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 MEIS1O00470 390 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 ZBTB5O15062 677 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 TYROBPO43914 113 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 COQ9O75208 318 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 CIB2O75838 187 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 VIL1P09327 827 aaKnown RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 UBTFL6P0CB48 400 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 GLULP15104 373 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 RBM5P52756 815 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 RPS8P62241 208 aaKnown RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 AP2B1P63010 937 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 AP3B2Q13367 1082 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 TRIP13Q15645 432 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 CCNG2Q16589 344 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 GPATCH4Q5T3I0 446 aaKnown RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 FAM91A1Q658Y4 838 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 LVRNQ6Q4G3 990 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 MARK2Q7KZI7 788 aaKnown RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 NET1Q7Z628 596 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 NCAPG2Q86XI2 1143 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 SLC9A9Q8IVB4 645 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 MYCT1Q8N699 235 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 IWS1Q96ST2 819 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 POLR3CQ9BUI4 534 aaPredicted RBP9.51□□□□□ -0.89
SNHG1-209ENST00000538654 BHMT2Q9H2M3 363 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 KRT82Q9NSB4 513 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 MTMR4Q9NYA4 1195 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 HEY2Q9UBP5 337 aa9.51□□□□□ -0.89
SNHG1-209ENST00000538654 RSPH10B2B2RC85 870 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 TM9SF1O15321 606 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 TGDSO95455 350 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 RSPH10BP0C881 870 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 TRIM49P0CI25 452 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 TRIM49CP0CI26 452 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 CRABP2P29373 138 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PGM1P36871 562 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ARFIP2P53365 341 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ZNF543Q08ER8 600 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 THOC5Q13769 683 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 SLC1A5Q15758 541 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PKN2Q16513 984 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 TRMT5Q32P41 509 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 EFCAB3Q8N7B9 438 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 LMO3Q8TAP4 145 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ETNPPLQ8TBG4 499 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PIP4K2CQ8TBX8 421 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 CCDC110Q8TBZ0 833 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 DTX3LQ8TDB6 740 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ALKBH8Q96BT7 664 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 FAM81BQ96LP2 452 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ECSITQ9BQ95 431 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ANO3Q9BYT9 981 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 TGIF2Q9GZN2 237 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 VPS11Q9H270 941 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 METTL5Q9NRN9 209 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ARL8BQ9NVJ2 186 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 NDE1Q9NXR1 346 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PSMC3IPQ9P2W1 217 aaPredicted RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 FETUBQ9UGM5 382 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 POLG2Q9UHN1 485 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 GRID1Q9ULK0 1009 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 NEU2Q9Y3R4 380 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 SPATA31A5Q5VU36 1347 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms