RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 MMS19Q96T76 1030 aa21.98■■□□□ 1.11
COPS7A-208ENST00000538410 EIF3CQ99613 913 aaKnown RBP21.98■■□□□ 1.11
COPS7A-208ENST00000538410 DESI2Q9BSY9 194 aa21.98■■□□□ 1.11
COPS7A-208ENST00000538410 SYT11Q9BT88 431 aa21.98■■□□□ 1.11
COPS7A-208ENST00000538410 TBC1D13Q9NVG8 400 aa21.98■■□□□ 1.11
COPS7A-208ENST00000538410 GJB5O95377 273 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 ZNF132P52740 706 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 BPIFB4P59827 614 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 EPS8L1Q8TE68 723 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 CASD1Q96PB1 797 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 PAAF1Q9BRP4 392 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 ACP6Q9NPH0 428 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 SPTLC3Q9NUV7 552 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 ADGRG1Q9Y653 693 aa21.97■■□□□ 1.11
COPS7A-208ENST00000538410 ESPNB1AK53 854 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 LCA5LO95447 670 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 CYP11B1P15538 503 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 IGFBP4P22692 258 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 PDE6CP51160 858 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 DSC1Q08554 894 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 NOP9Q86U38 636 aaKnown RBP21.96■■□□□ 1.11
COPS7A-208ENST00000538410 VPS36Q86VN1 386 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 TTC39CQ8N584 583 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 RSPH1Q8WYR4 309 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 RAD9AQ99638 391 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 AGPAT1Q99943 283 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.96■■□□□ 1.11
COPS7A-208ENST00000538410 NOCTQ9UK39 431 aaKnown RBP21.96■■□□□ 1.11
COPS7A-208ENST00000538410 CHD9Q3L8U1 2897 aa21.96■■□□□ 1.11
COPS7A-208ENST00000538410 TSC2P49815 1807 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 DDHD2O94830 711 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 GATMP50440 423 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 TAP1Q03518 808 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 INCA1Q0VD86 236 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 ADGRE1Q14246 886 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 BMS1Q14692 1282 aaKnown RBP21.95■■□□□ 1.1
COPS7A-208ENST00000538410 SLC18A3Q16572 532 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 FAM117BQ6P1L5 589 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 ZNF280BQ86YH2 543 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.95■■□□□ 1.1
COPS7A-208ENST00000538410 C17orf53Q8N3J3 647 aaPredicted RBP21.95■■□□□ 1.1
COPS7A-208ENST00000538410 ACRBPQ8NEB7 543 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 OLIG1Q8TAK6 271 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 SLC20A1Q8WUM9 679 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 CERS4Q9HA82 394 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 KCND1Q9NSA2 647 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 ADAMTS1Q9UHI8 967 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 A0A087X0T9 212 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 ZNF263O14978 683 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 CILPO75339 1184 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 CCDC175P0C221 793 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 FAM228BP0C875 321 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 RNASELQ05823 741 aaKnown RBP21.95■■□□□ 1.1
COPS7A-208ENST00000538410 GFPT1Q06210 699 aaPredicted RBP21.95■■□□□ 1.1
COPS7A-208ENST00000538410 SOWAHAQ2M3V2 549 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 LIMS2Q7Z4I7 341 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 CCAR2Q8N163 923 aaKnown RBP21.95■■□□□ 1.1
COPS7A-208ENST00000538410 C3orf58Q8NDZ4 430 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 RABGGTAQ92696 567 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 PPP2R2CQ9Y2T4 447 aa21.95■■□□□ 1.1
COPS7A-208ENST00000538410 REXO2Q9Y3B8 237 aaKnown RBP21.95■■□□□ 1.1
COPS7A-208ENST00000538410 B4GALT3O60512 393 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 ARHGEF15O94989 841 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 IPO7O95373 1038 aaKnown RBP21.94■■□□□ 1.1
COPS7A-208ENST00000538410 TNFAIP3P21580 790 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 IGFBP6P24592 240 aaPredicted RBP21.94■■□□□ 1.1
COPS7A-208ENST00000538410 KRT83P78385 493 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 DPH6Q7L8W6 267 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 COLGALT2Q8IYK4 626 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 SLC30A5Q8TAD4 765 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 LNX1Q8TBB1 728 aaPredicted RBP21.94■■□□□ 1.1
COPS7A-208ENST00000538410 WHAMMQ8TF30 809 aa21.94■■□□□ 1.1
COPS7A-208ENST00000538410 DDX1Q92499 740 aaKnown RBP21.94■■□□□ 1.1
COPS7A-208ENST00000538410 FAM193BQ96PV7 902 aaPredicted RBP21.94■■□□□ 1.1
COPS7A-208ENST00000538410 MRPL9Q9BYD2 267 aaKnown RBP21.94■■□□□ 1.1
COPS7A-208ENST00000538410 BARX2Q9UMQ3 279 aaPredicted RBP21.94■■□□□ 1.1
COPS7A-208ENST00000538410 COL4A6Q14031 1691 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 LCHNA4D1U4 455 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 DDX3XO00571 662 aaKnown RBP eCLIP21.93■■□□□ 1.14e-8■■■■■ 39.8
COPS7A-208ENST00000538410 ZSCAN12O43309 604 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 HUS1O60921 280 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 TACC1O75410 805 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 UPP2O95045 317 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 CALCAP01258 141 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 CHRNB2P17787 502 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 PAX3P23760 479 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 GNA15P30679 374 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 CDR2Q01850 454 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 CYP27A1Q02318 531 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 SPA17Q15506 151 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 ZNF394Q53GI3 561 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 DCLRE1AQ6PJP8 1040 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 ZNF677Q86XU0 584 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 GLYCTKQ8IVS8 523 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 TOP6BLQ8N6T0 577 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 APPL2Q8NEU8 664 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 PPM1EQ8WY54 764 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 ARNTL2Q8WYA1 636 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 TOP1MTQ969P6 601 aa21.93■■□□□ 1.1
COPS7A-208ENST00000538410 MRPL45Q9BRJ2 306 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms