RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MRGBPQ9NV56 204 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 CRLS1Q9UJA2 301 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 ITIH6Q6UXX5 1313 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 ICAM1P05362 532 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 HSPA1AP0DMV8 641 aaKnown RBP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 HSPA1BP0DMV9 641 aaKnown RBP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 MUTP22033 750 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 CATSPER1Q8NEC5 780 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 TRAF3IP3Q9Y228 551 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 HEATR9A2RTY3 570 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 ITGB3P05106 788 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 TJAP1Q5JTD0 557 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 CYP4A22Q5TCH4 519 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 PLEKHH3Q7Z736 793 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 MRPL1Q9BYD6 325 aaKnown RBP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 UBE2Q2LH0YL09 131 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 CHRM3P20309 590 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 DMTNQ08495 405 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 ZNF177Q13360 481 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 RABGAP1LQ5R372 815 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 USP13Q92995 863 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 CFAP73A6NFT4 308 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 RSPH10B2B2RC85 870 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 CLASP2O75122 1294 aaKnown RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 RSPH10BP0C881 870 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 CYP11B2P19099 503 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 EIF2B5Q13144 721 aaKnown RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 ZNF484Q5JVG2 852 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 GRAMD4Q6IC98 578 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 DPP3Q9NY33 737 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 VPS9D1Q9Y2B5 631 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 CST8O60676 142 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 HPCAP84074 193 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 MTF1Q14872 753 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 SPATA21Q7Z572 469 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 TRIM48Q8IWZ4 208 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 NUP93Q8N1F7 819 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 PHF21AQ96BD5 680 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 LRRC1Q9BTT6 524 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 METTL5Q9NRN9 209 aaKnown RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 TMEM253P0C7T8 217 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 SLC9A1P19634 815 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 PGM1P36871 562 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 EFL1Q7Z2Z2 1120 aaKnown RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 B4GALNT2Q8NHY0 566 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 CHP1Q99653 195 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 TRIM51Q9BSJ1 452 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 APOL5Q9BWW9 433 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 PCMTD2Q9NV79 361 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 CHMP2BQ9UQN3 213 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 UNC13BO14795 1591 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 STX7O15400 261 aaKnown RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 RBP3P10745 1247 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 PTGER2P43116 358 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 GCLCP48506 637 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 ITPK1Q13572 414 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 HIST2H2ACQ16777 129 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 HIST2H2AA3Q6FI13 130 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 CD302Q8IX05 232 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 VPS37AQ8NEZ2 397 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 C9orf72Q96LT7 481 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 RANBP17Q9H2T7 1088 aaKnown RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 ZNF556Q9HAH1 456 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 EPB41L4AQ9HCS5 686 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 ALDH1A2O94788 518 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 EPHB2P29323 1055 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 PCYOX1LQ8NBM8 494 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 FEZF2Q8TBJ5 459 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 C6orf203Q9P0P8 240 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-205ENST00000538291 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
SCARB1-205ENST00000538291 LRRIQ3A6PVS8 624 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 ANXA9O76027 345 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 BOLA3Q53S33 107 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 LINC00523Q86TU6 105 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 RIC8BQ9NVN3 520 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 TBX20Q9UMR3 447 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 VGLL3A8MV65 326 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 FAM107AO95990 144 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 EGFRP00533 1210 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 CAPZA2P47755 286 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 KDSRQ06136 332 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 BFSP2Q13515 415 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 TMCO5AQ8N6Q1 288 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 SEPT8Q92599 483 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 MRPS31Q92665 395 aaKnown RBP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 PLEKHA8Q96JA3 519 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 ADGRB3O60242 1522 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 PJA2O43164 708 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 RHOBTB1O94844 696 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 COMTP21964 271 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 BRD2P25440 801 aaKnown RBP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 FMR1Q06787 632 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 POLD3Q15054 466 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 ERO1BQ86YB8 467 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 ARRDC4Q8NCT1 418 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 DPF2Q92785 391 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms